Marinibacterium anthonyi: LA6_003963
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Entry
LA6_003963 CDS
T10601
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
manh Marinibacterium anthonyi
Pathway
manh03030
DNA replication
manh03430
Mismatch repair
manh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
manh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LA6_003963 (dnaE1)
03430 Mismatch repair
LA6_003963 (dnaE1)
03440 Homologous recombination
LA6_003963 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
manh03032
]
LA6_003963 (dnaE1)
03400 DNA repair and recombination proteins [BR:
manh03400
]
LA6_003963 (dnaE1)
Enzymes [BR:
manh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LA6_003963 (dnaE1)
DNA replication proteins [BR:
manh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LA6_003963 (dnaE1)
DNA repair and recombination proteins [BR:
manh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LA6_003963 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QEW21751
LinkDB
All DBs
Position
complement(4132320..4135820)
Genome browser
AA seq
1166 aa
AA seq
DB search
MSSTPGFVHLRLHTEYSLLEGAVRLKKLPGQCTTLGMPAVAVTDTNNLFCALEFSVYAAD
AGLQPILGMQTDLAYLTPEPGQKPRPPAPLVLLAQNETGYENLMALNTCLYVGKGGQLPQ
VTLEELEAHSDGVICLTGGPDGPVGRLLQTGHRPEAEALVQRLAKTFPDRLYIELQRHPG
EDGQPEAERLTERGHVEMAYAMDLPLVATNDVYFPKPDMYEAHDALICIAEGAYVDQQED
RRRLTSQHYLKSPQEMATLFADLPEAIENTVEIAQRCAFMAYRRDPILPKFADNEVAELR
RQAVEGLKARLEVIPHAAPVEEYEKRLEFELGIIEGMGFPGYFLIVADFIKWAKDHDIPV
GPGRGSGAGSLVAYALTITNLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QEKYGHDKVAQIITFGALLSKAAVRDVGRVLQLPYGQVDRLSKMIPVEGVKPVSIEKALQ
DEPRLREEARNEEVVNRLLTYGQQVEGLLRNASTHAAGVVIGDRPLDRLVPLYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAIDLILKSGRPLHVAADGTELYAPVPGTE
NDIDAIPLDDEATYKLYAAAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLKQITSVHPSIDHILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFEKGAAENGVDKKKATEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TGWLKANHPVEFMAGVMNCDIHLTDKLAIYFEEVRKGLALPYVPPCVNRGQPTFDVRDGQ
LIYALGALKNVGIEAMKLVTEGRGDHPFVNLYDFARRVDLKKVGKRPLEMLVRSGAFDTL
DGNRRRVFDSLDALVAYSAAIHEQKASAQVSLFGEAGEDLPEPRLSPVSDWLPAERLGEE
FKAIGFYLTGHPLDDYMAPLRRQNVLTLDDVTAKAQGGPLIAKLAGVVTARQERKSAKGN
RFAFVGMSDPTGNYEVTLFSEALEASREFLETGSNVVVTVEATMESDQLKLLGRSVAPID
KAVAAGGTSGLRIYIDDAKAVAIVAGVLEQANAAAKAAARGPVQLCLQHPSLPGEVDLDL
GSDFAVNPQIKGALKSLDGVVTVEDL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcacccccggattcgtccacctccgccttcacaccgaatattcccttctcgaa
ggcgccgtccgcctgaagaaactgccgggccaatgcacgacgctcggcatgcccgcggtg
gcggtgacggacaccaacaaccttttctgcgcgcttgagttttccgtctatgccgccgac
gccgggctgcagccgatcctcggcatgcagaccgacctggcctacctgacaccggaaccg
ggccagaaacccaggccccccgcgccgctggtcctgcttgcgcagaacgagaccgggtat
gaaaacctcatggcgctcaacacctgtctctacgtgggcaagggcggtcagctgccgcag
gtcacgcttgaggagctggaggcgcattcggacggtgtcatctgcctgaccgggggcccc
gatggccccgtcgggcggctgctgcagaccggtcaccggcccgaggccgaagcgctggtg
cagcgtctggcgaaaaccttcccggaccggctgtacatcgaactgcaacgccatcccggc
gaggacggccagcccgaagccgaacggctcaccgaacgcggccatgtggaaatggcctat
gccatggacctaccgctggtggcgaccaacgatgtctacttcccgaaaccggacatgtac
gaggcccacgatgcgctgatctgcatcgccgagggcgcctatgtcgaccagcaggaagac
cgccgccggttgacctcgcagcattacctgaagtccccgcaggagatggcgacgctgttc
gcggacctgcccgaggccatcgagaacaccgtcgagatcgcgcagcgctgcgccttcatg
gcctatcgccgcgacccgatcctgccgaaattcgccgacaacgaggtcgccgaactgcgc
cgccaggccgtcgaggggctgaaggcccggctggaggtcattccccacgccgcgcccgtc
gaggaatacgagaagcggctggaattcgagctgggcatcatcgagggcatgggctttccc
ggctacttcctgatcgttgccgacttcatcaagtgggccaaggatcacgacatcccggtg
gggccggggcgggggtccggggcgggcagcctggtggcctatgcgctgaccatcaccaac
ctcgacccgctgcgctacagcttgctgttcgaacggttcctgaaccccgaacgggtgtcg
atgcccgacttcgacatcgacttctgcatggaccgccgcgaagaggtgatccgctacgtg
caggagaaatacggccacgacaaggtggcccagatcatcaccttcggcgcgcttctgtcc
aaggccgccgtgcgcgacgtgggccgggtgctgcaactgccctatggccaggtcgaccgg
ctgtccaagatgatccccgtcgaaggggtcaagccggtgtcgatcgaaaaggcgctgcag
gacgaaccccgcctgcgggaagaggcgcgcaacgaagaggtcgtcaaccggctgctgacc
tatggccagcaggtcgaggggctgctcaggaacgcatccacccacgccgccggcgtggtg
atcggcgaccggccgttggaccggctggtgccgctgtaccaggatccgcggtccgacatg
ccggcgacccagttcaacatgaaatgggtggaacaggccgggctggtgaagttcgacttc
ctcggcctcaagaccctgaccgtcatccagaacgcgatcgacctgatcctgaaatccggc
cggcccctgcacgtcgccgccgacggaaccgaactgtacgcccccgttcccggcaccgag
aacgacatcgacgcgatcccgctggatgacgaggccacgtacaagctctacgccgccgcc
aagacggtcgcggtgttccaggtggaaagctcgggcatgatggatgcgctgaagcgcatg
aaacccacctgcatcgaggatatcgtcgcgctcgtggcgctgtatcgtccggggccgatg
gaaaacatcccgacctattgcgaggtcaagaacgggctcaagcagatcacgtccgtccac
ccctcgatcgaccatatcctggcggagacccagggcatcatcgtctaccaggaacaggtg
atgcagattgcccaggtgatggcgggctattcgcttggcggcgccgacctgctgcgccgc
gccatgggcaagaagatcaaggaggcgatggacgccgaacgtcccaagttcgaaaagggc
gcggcggagaatggcgtcgacaagaagaaggcgaccgaggtcttcgaccttctggagaaa
ttcgccaactacggcttcaacaagtcccacgcggcggcctacgccgtggtcagctaccag
accggctggctgaaggcgaaccacccggtcgagttcatggccggcgtcatgaactgcgat
atccacctgaccgacaagctggcgatctatttcgaggaggtccgtaagggtctggcgctg
ccctatgtgccgccctgcgtgaaccgcggccagccgaccttcgacgtcagggacgggcag
ttgatctatgcgctgggcgcgctgaagaacgtcggcatcgaggcgatgaagctggtgacg
gaaggacggggcgaccaccccttcgtcaacctctacgatttcgcccgccgtgtggacctg
aagaaggtcggcaagcgcccgctcgagatgctggtgcgctcgggcgccttcgacacgctc
gacggcaaccgccgccgcgtcttcgattcgctcgacgcgctggtcgcctattcggcggcg
atccacgaacagaaggcttcggcccaggtgtcgctgttcggcgaagcgggcgaagacctg
ccggaaccgcgcctgtcgccggtgtcggactggctgccggcggaacgtttgggcgaggaa
ttcaaggcgatcggcttctacctgacgggccacccgctggacgattacatggccccgctg
cgccgtcagaacgtgctgacgctggacgacgtgacggccaaggcccagggcggcccgctg
atcgccaagctggcgggcgtggtcaccgcgcgccaggaacggaaatcggccaagggcaac
cgctttgcctttgtcggcatgtccgatcccacgggcaattacgaggtcacgctgttctcc
gaggcgctggaggcgtcgcgcgagttcctggaaaccgggtcgaacgtggtggtcacggtc
gaggcgacgatggaatcggatcagctgaagctgctgggccggtcggtcgcgccgatcgac
aaggcggtggcggcaggcgggacatccggactcaggatctacatcgacgacgccaaggcg
gtggcgatcgtggcgggtgtgctggaacaggccaacgcggcggcgaaggccgcggcgcgg
gggccggtgcaattgtgcctgcagcacccgtccttgccgggcgaggtggacctggacctc
ggctcggatttcgcggtgaacccgcagatcaagggcgcgctgaaatcgctggatggcgtg
gtgacggtcgaggacctctga
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