Marinibacterium anthonyi: LA6_004824
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Entry
LA6_004824 CDS
T10601
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
manh Marinibacterium anthonyi
Pathway
manh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA6_004824 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manh03019
]
LA6_004824 (pnp)
03016 Transfer RNA biogenesis [BR:
manh03016
]
LA6_004824 (pnp)
Enzymes [BR:
manh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LA6_004824 (pnp)
Messenger RNA biogenesis [BR:
manh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LA6_004824 (pnp)
Transfer RNA biogenesis [BR:
manh03016
]
Prokaryotic type
tRNA degradation factors
LA6_004824 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QEW22592
LinkDB
All DBs
Position
5054152..5056299
Genome browser
AA seq
715 aa
AA seq
DB search
MFNVTTKSMQWGEETLTLETGKVARQADGTVIATLGETSVMANVTYARAQKEGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTLSGAPFMGPIAGCRVGYEDGEYILNPTVDDMQGLRLNPDQR
LDLVVAGTKDAVMMVESEAYELTEAEMLGAVTFAHEQIQPVIDLIISLAESAAKEPFDFT
PPDYSELSAAVKAAGEDKMRAAFAIKDKQERVAAVGAAREAILAALTEEQAADKNLGSAL
KKLEASILRGDVVKGGTRIDGRSTTDVRPIEAETGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
PTDFPYTIRIVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEDDGSYA
ILTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMEKALAQAKDGRMHILGE
MSKALSETKGFSVHAPRIETMTIPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGVIKI
ASADGDAIQKAYDMIYAIVAEPEEGQVYTGKVVKIVDFGAFVNFFGKRDGLVHVSQIMNK
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEIVEEKKQKEEAEE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgttacgacgaaatccatgcagtggggcgaggaaacgcttacactggaaacg
ggcaaggttgcccgtcaggcggatggcaccgtgatcgccacgctgggcgaaaccagcgtg
atggcgaacgtgacctacgccagggcacagaaagagggccaggatttcttccccctcacc
gttcactaccaggaaaaatattacgcggccggcaagatcccgggcggcttcttcaagcgc
gaagcgcggccgaccgaaaaggaaacgctgaccgcacgtctgatcgaccgtccgatccgc
ccgctgttcgtccccggcttcaagaacgaagtcctggtgatgtgcaccgtgctgagccac
gatctggtcaatgaccccgacatcgtcgcgatgatcgccgcctcggccgcgctgacgctt
tcgggcgctccgttcatgggcccgatcgccggctgccgcgtgggctacgaggatggagaa
tacatcctgaacccgaccgtcgacgacatgcagggcctgcgcctgaacccggatcagcgc
ctggacctggtggttgccgggaccaaggacgccgtgatgatggtggaatcggaagcctac
gagctgaccgaagccgaaatgctgggtgccgtgacctttgcgcacgagcagatccagccg
gtcatcgacctgatcatctcgctggccgaatccgccgcgaaagagccgttcgacttcacg
ccgccggattattccgagctgtccgcagccgtgaaggccgccggtgaagacaagatgcgc
gccgctttcgcgatcaaggacaagcaggaacgcgtggccgccgttggcgccgcccgcgag
gccatcctggccgcgctgaccgaagaacaggccgccgacaagaaccttggttcggcgctg
aagaagctggaagcgtcgatcctgcgcggtgacgtggtcaagggcggcacccggatcgac
gggcgttcgaccaccgacgtgcgtccgatcgaagccgaaaccggcctgctgccgcggacc
cacgggtcggcgctgttcacccggggtgaaacccagggcctggtcgtgaccacgctgggc
accggcgatgacgaacagttcatcgacgcgctgcacggcaacttcaaatcgaacttcctg
ctgcattacaacttcccgccgtattcggtcggtgaagtgggccgcgtcgggtcgccgggt
cgccgtgaaatcggccacggcaagctggcatggcgcgcgctgcaggcggttctgcccgcc
ccgaccgacttcccctacacgatccgcatcgtgtccgagatcaccgaatccaacggctcg
tcctcgatggcgtcggtctgcggtgggtcgctgtcgatgatggacgcgggcgttccgctg
aaatcggcggttgccggtgtggccatgggcctgatcctggaagacgacgggtcctacgcg
atcctgaccgacatcctgggcgacgaagaccacctgggcgacatggacttcaaggtcgcg
ggtacggaaaacggcatcacgtcgctgcagatggacatcaaggtcgcgggcatcacgccc
gagatcatggagaaagccctggcgcaggccaaggacggccggatgcacatcctgggcgag
atgtccaaggccctgtcggaaaccaagggtttcagcgtccacgcaccgcgcatcgaaacg
atgaccatccccaccgacaagatccgtgaagtgatcgggtccggcggcaaggtcatccgc
gagatcgtggaagtgtcgggcgccaaggtcgacatcaacgacgacggcgtgatcaagatc
gcttcggccgacggtgacgcgatccagaaggcctatgacatgatctacgcgatcgtggca
gagccggaagaaggccaggtttacaccggcaaggtcgtgaagatcgtcgatttcggcgcc
ttcgtgaacttcttcggcaagcgcgacggcctggtgcacgtgtcccagatcatgaacaag
cgcctgaaccatccttcggacgttctgaaggaaggccaggaagtgaaggtcaagctgctg
ggctttgacgatcgcggcaaggttcgcctgtcgatgaaggtcgtcgaccaggagaccggc
gaagagatcgtcgaagagaagaaacagaaggaagaagccgaggagtga
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