Macrococcus animalis: ACMGE9_08195
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Entry
ACMGE9_08195 CDS
T11257
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
manm Macrococcus animalis
Pathway
manm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACMGE9_08195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manm03019
]
ACMGE9_08195
03009 Ribosome biogenesis [BR:
manm03009
]
ACMGE9_08195
Enzymes [BR:
manm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACMGE9_08195
Messenger RNA biogenesis [BR:
manm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACMGE9_08195
Ribosome biogenesis [BR:
manm03009
]
Prokaryotic type
rRNA helicases
ACMGE9_08195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Flavi_DEAD
AAA_30
Cas3-like_C_2
AAA_19
MTPAP-like_central
Motif
Other DBs
NCBI-ProteinID:
XNZ52569
LinkDB
All DBs
Position
1568776..1570302
Genome browser
AA seq
508 aa
AA seq
DB search
MQKFRDLGISEPTINALEKLGFTEPTPIQTDSIPHTMAGRDVLGQAQTGTGKTGAFGIPL
IEKVKGQEGIKSLILAPTRELAVQVAEQLKAFSRGQGIQVATVFGGMPIDRQIRELKKKP
QIVVGTPGRVIDHLNRRTLKTEDINTLILDEADEMMNMGFIDDMRFIMDKLPKEQRQTML
FSATMPRAIQELVQKFMKDPIIVKTMTNVDSNPDIDEHYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISRGYRAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDVESYTHRIGRTGRAGKHGMAISFVNPVEMDYIRQIEKSKN
RTMTALRPPTPGEVMQARELDVKTKVNGWVEKETEARIESIAQELINEHGDVKLVASLLQ
ELIKSNNDVDVQLTFEKPLGRKGSGGKSYGRGRGGNGGGRSGGGSRSRSKDGGKDNRRKS
FDRGGKPGAPSKGGKKPFKARTFADHKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttagagacctaggtatcagcgaacctaccataaatgcgctggagaaattg
ggatttacagaacctacaccgattcaaacggatagtatccctcatacgatggcaggccgt
gacgtattaggccaagcgcaaactggtactggtaagactggtgcttttggaataccttta
attgagaaagttaaaggccaagaggggatcaaaagtttaattcttgctcctacacgtgaa
ttagctgtccaagttgctgaacaattaaaagcatttagccgtggacaaggtattcaagta
gcgactgtattcggtggaatgccgattgaccgtcaaattagagaattaaaaaagaaaccc
caaatcgtggttgggacgcctggtcgtgtaatcgatcacttaaaccgtcgtacgttaaaa
actgaagacatcaatactttaatcttagatgaagctgatgaaatgatgaacatgggattc
atcgatgatatgcgttttattatggataaattaccgaaagaacaacgtcaaacaatgtta
ttctcagcaacgatgccgagagcaattcaagaattagttcaaaagttcatgaaagatcct
atcattgttaagacaatgactaacgttgattcaaatcctgatatcgatgagcattacaca
atcgttaaagaattagagaagtttgatactttcactaatttcctagatgtacatcaacct
gaacttgcaattgtattcggacgtactaaacgtcgtgttgatgaattaacaagtgcgtta
atctcaagaggataccgtgcagaaggtttacacggagacatcacacaagcgaaacgttta
gaagtattaaagaaatttaaaaacgaccaaattgatatccttgttgctacagacgttgct
gcacgtggattagatatttctggcgtatctcatgtttataacttcgatatccctcaagat
gttgaaagttatacacaccgtatcggtcgtacaggacgagcgggtaaacatggtatggcg
atttcatttgttaatccagttgaaatggattacattcgtcaaatcgaaaaatctaaaaac
cgtacaatgactgctttacgcccaccaacaccaggtgaagtaatgcaagcacgtgaatta
gacgttaagactaaagtcaatggatgggttgaaaaagaaactgaagctcgtattgagtca
atcgctcaagaattaattaatgaacatggtgatgtgaaattagtagcgtcattattacaa
gaattaattaaatcaaacaatgacgttgatgttcaattaacatttgaaaagccacttggc
cgtaaaggtagtggtggtaaatcatacggacgtggacgcggcggaaatggcggaggacgc
tcaggtggcggatctcgtagccgttctaaagatggcggtaaagataatcgtcgtaaatcg
ttcgaccgtggtggtaaaccaggtgctccttctaaaggtggcaaaaagccattcaaagca
agaacatttgcagaccataaaaaatag
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