Macrococcus animalis: ACMGE9_08905
Help
Entry
ACMGE9_08905 CDS
T11257
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
manm Macrococcus animalis
Brite
KEGG Orthology (KO) [BR:
manm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
manm03009
]
ACMGE9_08905 (rlmD)
Enzymes [BR:
manm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACMGE9_08905 (rlmD)
Ribosome biogenesis [BR:
manm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACMGE9_08905 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Methyltransf_25
Cons_hypoth95
MTS
TRAM
TRM5-TYW2_MTfase
PrmA
Methyltransf_11
RrnaAD
N6_Mtase
Ubie_methyltran
TRM
N6_N4_Mtase
Methyltr_RsmB-F
Methyltransf_32
Methyltransf_4
Methyltransf_23
UPF0020
Methyltransf_12
CMAS
Methyltrans_SAM
TPR_30
Motif
Other DBs
NCBI-ProteinID:
XNZ52699
LinkDB
All DBs
Position
1709835..1711199
Genome browser
AA seq
454 aa
AA seq
DB search
MKQINFNKNDELQGTVVDLTHEGAGVVKIDDYPFFVEGALPGEDVTIKVMKVGKNFGFAR
LVSIQTQSPDRVAEKDIVGRQIGTMTLQHLSYEAQLKFKQHLVESAFERLGKFKNIKVAE
TIGMEVPYEYRNKAQIPVRSVNGMLETGFFRKNSHQLVPVENFYIQHKAIDEAIVKVRDI
LRKYDVVPYNERNHNGEVRHIVVKLGHYTGQLMIILVTNKKRLQNIESITHDIVNTIDNV
ESVVLNFNNQEGNVILGRNNTVLHGTPYYTDKMLGLDFRVSPNSFFQVNTPQAEELYKLA
LEAADLNGTETVLDAYCGIGTISLALAKQAKQVYAMEIVHESIKMAKQNAKMNGIENVRF
ETGAADEILPKWSEEGVKFDVALVDPPRKGLDDEFIQTLIAQNPKKIVYVSCNPSTCARD
CRKFADAGYKIETVKPVDMFPQTAHTEVVVRLTK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaattaactttaacaagaatgacgaattacaagggacagtagtagatttaaca
cacgaaggagcaggtgtcgttaagattgatgattatccatttttcgttgaaggcgcttta
ccaggtgaagacgttacaatcaaagtaatgaaagtcggtaaaaattttggatttgctcgt
ctagtatcaattcaaacacaaagcccagaccgtgtggcagagaaagatatcgttggacgc
caaattggtacgatgacattacaacatctatcatatgaagcacaacttaaattcaaacag
catttagttgaaagtgcgtttgaacgtttagggaaatttaaaaatattaaagttgctgaa
acaattggcatggaagtaccttacgaatatcgtaataaagcgcaaattccagtaagatca
gtgaacggtatgcttgaaacaggattcttcagaaagaacagtcatcaactagtgcctgtt
gagaatttctatattcaacataaagcgattgatgaagcaattgtgaaagtaagagatatt
ttacgtaaatatgatgttgtaccttataacgagcgtaatcataatggagaagtacgacat
atcgttgtgaaacttggacattatacgggtcaattaatgattatattagtgacaaataaa
aagcgtctacaaaatatcgaatcaattacacatgatattgtaaatacaattgataacgtt
gaaagtgttgtattaaacttcaataatcaagaaggcaatgtgattctaggccgtaacaat
acagtattacacggcacaccatactacacggacaagatgttaggtttagactttagagta
tcaccaaactcattcttccaagtgaatacaccgcaagcagaagaattatataaattagca
ttagaggcggctgatttgaacggtactgaaacagtgttggatgcgtattgtggtatcggt
acaatctctttagcattagcgaaacaagcgaaacaagtttacgcgatggaaatcgtccat
gaatcaattaagatggcgaaacaaaatgcgaaaatgaatggcattgaaaatgtacgtttt
gaaacgggtgcagcagatgaaatcttaccgaagtggagcgaagaaggcgttaagtttgat
gttgctttagtcgatccaccacgtaaaggattagacgatgagtttattcaaacgttaatt
gcgcaaaatcctaaaaagattgtttacgtgagttgtaacccatcaacatgtgcccgtgac
tgtcgtaaatttgcagatgcaggttacaagattgaaacagtaaaaccagtcgatatgttc
cctcaaacagcacataccgaggtcgtagttagacttacgaagtaa
DBGET
integrated database retrieval system
