Mannheimia pernigra ZY170218: GM695_00805
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Entry
GM695_00805 CDS
T06423
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
mann
Mannheimia pernigra ZY170218
Pathway
mann02024
Quorum sensing
mann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM695_00805 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GM695_00805 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mann03019
]
GM695_00805 (hfq)
03036 Chromosome and associated proteins [BR:
mann03036
]
GM695_00805 (hfq)
Messenger RNA biogenesis [BR:
mann03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GM695_00805 (hfq)
Chromosome and associated proteins [BR:
mann03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GM695_00805 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Gag_p24_C
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
QHB16707
LinkDB
All DBs
Position
164371..164646
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AA seq
91 aa
AA seq
DB search
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARALSHNNNNPHHQHAQAATEAAEQTE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggtcaatctttacaagatccatatttgaatgcacttcgccgtgagcgtatt
cctgtttcaatttatttagttaacggtattaaattacaaggtcagattgagtcgttcgac
caattcgtcattttactaaaaaacacggtcagccaaatggtatataaacacgcgatttca
actgttgtacctgctcgagcgttatcgcacaacaataacaacccccatcatcaacacgct
caagctgcaacagaagcagctgaacaaacggaataa
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