Mannheimia pernigra ZY170218: GM695_05015
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Entry
GM695_05015 CDS
T06423
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mann
Mannheimia pernigra ZY170218
Pathway
mann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GM695_05015 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mann03400
]
GM695_05015 (ruvB)
Enzymes [BR:
mann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GM695_05015 (ruvB)
DNA repair and recombination proteins [BR:
mann03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GM695_05015 (ruvB)
RecFOR pathway proteins
GM695_05015 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_3
Rad17
TIP49
Mg_chelatase
AAA_2
nSTAND3
AAA_16
AAA_14
AAA_24
AAA_18
AAA_17
RNA_helicase
Bac_DnaA
NTPase_1
NB-ARC
AAA_28
GGDEF_2
ABC_tran
bpMoxR
TsaE
Sigma54_activ_2
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QHB17430
LinkDB
All DBs
Position
complement(991957..992961)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRIISASPKREEEVIDRAIRPKLLANYVGQPSVRDQMEIFIKAAKLRDEALDHLLI
FGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLTNLEPYDVLFIDEIHRLSP
AIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYSVDDLTLIVKRSADCLNLNLSADGAYEVARRSRGTPRIANRLLRRVRDYADVRNNG
IITSEIAKQALAMLDVDSEGFDFMDIKLLQAIVERFDGGPVGLDNLAAAIGEERDTIEDV
LEPYLIQQGFLQRTPRGRIATNRTYAHLGMTKID
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcagatagaatcatcagtgcctcaccaaaacgtgaggaagaagtcatcgac
cgtgcaattcgccctaaattgctcgctaattatgttgggcagccttctgtccgtgatcag
atggaaatctttattaaagccgctaaattgcgtgatgaagctctcgatcatttacttatt
ttcgggccacccggtttaggtaaaacaacccttgccaatattgtggcaaatgaaatgggc
gtgaatatccgaaccacttctggtccagtgttagagaaagctggcgacttagctgcaatg
ctgactaatcttgagccctacgatgttcttttcattgatgaaatccaccgcctctcgccc
gctattgaggaagtgctttaccccgcaatggaagattatcaacttgatattatgattggc
gaaggccccgccgcacgctcaattaagctcgacttacccccttttaccttagtgggggca
actacgcgtgctggatcactcacctcaccattacgagatcgttttggtattgtacaacga
ttggagttttattcagtcgacgatctcacgttaattgttaaacgcagtgccgactgcctc
aatctaaatttatcagcagatggcgcttatgaagtcgctcgccgctctcgtggcacacct
cgtattgccaaccgcctactccgccgtgtacgagattatgccgatgttcgcaataacggc
atcattacctcagaaattgccaaacaggcattagcaatgcttgatgtggactctgaagga
tttgattttatggacattaaattactacaagccattgtagaacgctttgatggagggcca
gtgggtttagataaccttgcggcggctatcggagaagagcgagatacaattgaagatgtg
ctagagccttatctcattcaacaaggctttctacaacgcacaccaagaggcagaattgcg
acgaatagaacttatgcacaccttggtatgactaaaattgattaa
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