Mannheimia pernigra ZY170218: GM695_05765
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Entry
GM695_05765 CDS
T06423
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mann
Mannheimia pernigra ZY170218
Brite
KEGG Orthology (KO) [BR:
mann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mann03021
]
GM695_05765 (rpoE)
Transcription machinery [BR:
mann03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GM695_05765 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
HTH_20
DUF3881
HTH_24
Repressor_Mnt
Motif
Other DBs
NCBI-ProteinID:
QHB17573
LinkDB
All DBs
Position
1165764..1166336
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AA seq
190 aa
AA seq
DB search
MSEQITDQELVEKAQKGDKKAFNLLVVRYQNRVASLLTRYVARDDIPDIVQESFIKAYRS
LESFRGESAFYTWLYRIAVNTAKNHLTSLGRRPPKEDILAEDAESYDVGAQLRESDTPEN
LVLSEELKKVVFDTIENLPEELKIAICLRELDGLSYEEIAEVMGCPIGTVRSRIFRAREA
IDAKINPLMQ
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgagcagatcaccgaccaagagttagtcgaaaaagcacaaaaaggtgataaaaaa
gcatttaatttacttgtagtacgctatcaaaatagagttgcgagtttactgactcgttat
gtagcaagagacgatattcctgacattgttcaagaatcttttattaaagcttaccgctct
ttagagtcttttcgtggggaaagtgctttttacacttggctttaccgtattgcagtcaat
actgcaaaaaatcatttaacgtctttgggcagaagaccacctaaagaggatattttagca
gaagatgctgaaagctatgatgtcggtgctcagcttcgtgaaagcgatacgcctgaaaat
ttagtgttatcggaagaattaaaaaaagttgtatttgatacgattgaaaatttacctgaa
gagcttaaaattgctatctgtttaagggaattagacggtttaagctatgaagaaatcgca
gaagtgatggggtgtccgataggaacagtacgttcacgtattttccgtgcaagggaagca
attgatgcgaaaatcaatccacttatgcagtaa
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