Mannheimia pernigra ZY170218: GM695_06850
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Entry
GM695_06850 CDS
T06423
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mann
Mannheimia pernigra ZY170218
Pathway
mann03030
DNA replication
mann03410
Base excision repair
mann03420
Nucleotide excision repair
mann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GM695_06850 (polA)
03410 Base excision repair
GM695_06850 (polA)
03420 Nucleotide excision repair
GM695_06850 (polA)
03440 Homologous recombination
GM695_06850 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mann03032
]
GM695_06850 (polA)
03400 DNA repair and recombination proteins [BR:
mann03400
]
GM695_06850 (polA)
Enzymes [BR:
mann01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GM695_06850 (polA)
DNA replication proteins [BR:
mann03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GM695_06850 (polA)
DNA repair and recombination proteins [BR:
mann03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GM695_06850 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GM695_06850 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QHB17767
LinkDB
All DBs
Position
1392832..1395690
Genome browser
AA seq
952 aa
AA seq
DB search
MATIAKNPLVLVDGSSYLYRAFHAFPSLTNQNGDPTGAMYGVLNMLKSLIAQVEPSHIAV
VFDAKGKTFRDQLFEQYKSHRPPMPDELRAQIQPLHAIIKALGIPLISIEGVEADDVIGT
LAVQAAKDGKDVLISTGDKDMAQLVNDHIMLINTMNNTLLDRKGVIEKYGIPPELIIDFL
ALMGDSADNIPGVKGVGEKTALALLQGIGSLKQIYENLDQIATLSFRGAKNFAPKLEAEK
ENADLSYLLATIKTDVELDVTHHQLLTQAQNRAELTTLFEYYEFKRWLNEVNNNANPLTR
ISAEKVPNHYQVTQAVKKEENVVDPIVIDRNKYETVDTQEKLAAWIGKLNSAKMVAVDTE
TDNLDSMSANLVGISFALENGEACYIPLGHKQKAEQKQVDMFGELSDTDNENSDELVKNQ
LNLTACLTQLKPILEHCGIKKIGQNIKYDLTIFSHYGIELQGVEFDTMIESYTQNSTGRH
NMDDLAARYLGHKTIPFEELAGKGKNQLTFDKIEIPKAAEYAAEDADVTMKLHQVLWQKL
AQEPELVKLFNEIEMPLVSVLSRIERNGVLIDPKKLLTQSAEIEKRLSEIEQLVHAEAGQ
TFNLASTKQLQEILFDKLGLPVLKKTPKGAPSTNEEVLDELAQQGHLVPKLLMEHRGLSK
LKSTYTDKLPQLINKKTGRVHTSYNQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFVA
REGYKIVAADYSQIELRIMAHLANDEGMIAAFAEGKDIHRATAAEIFSVALEEVTSEQRR
SAKAINFGLIYGMSSFGLSNQLGIGRAEAQKYMELYFKRYPAVQQFMTDIREVAAEKGYV
ETLFGRRLYLPDIKSSNAILRKAAERVAINAPMQGTAADIIKVAMIGIDKEIRGNHEIKM
IMQVHDELVFEVKADKLEQYSQLIKAEMEKAISLNVPLIAEVGIGDNWDEAH
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcaactatcgcaaaaaatccactggtgctagtggacggttcttcttatttatatcga
gcatttcacgcattcccttcgctaactaatcaaaatggagatccaacaggggcaatgtat
ggtgtattgaatatgttaaaaagcctgatcgcacaagtagaacccagccacattgccgtt
gtgtttgacgcgaaaggaaaaacttttcgtgatcaattgtttgagcaatataaatcgcac
cgtccgccaatgccagatgagttgcgtgctcaaattcaaccgttacacgctattattaaa
gcgttaggtattccactgatttcgattgaaggggtagaggcagatgatgttattggcaca
ttagctgtgcaagcagctaaagatggcaaagatgtgttaattagcacgggcgataaagat
atggcacaactggtgaacgatcacattatgttgattaacacaatgaataacaccctgctt
gatcggaaaggtgttattgaaaaatatggtattccacctgagttgatcatcgacttttta
gccctaatgggagattcagcagataatattcctggcgttaaaggcgttggtgaaaaaacc
gcactcgctttattgcaaggaattgggtcacttaaacagatttatgaaaatttagatcaa
attgcgacactttcgtttcgtggtgcaaaaaattttgcgccgaagttagaggcagaaaaa
gaaaatgcggatttatcttatctgctggcaacgattaaaaccgatgtggaattagatgtt
actcatcatcagcttttaacccaagcacaaaatcgtgcggaactgacgactttatttgaa
tattatgaattcaaacgttggctgaatgaggtaaataataacgccaatccccttactcgc
atatctgcagagaaagtgcccaatcattaccaagtgacacaagcggttaaaaaagaggaa
aatgttgtagatcctatcgtgattgaccgcaataaatatgaaacggtggacacacaagaa
aaattggcggcttggatcggcaaattgaattcagccaagatggttgcagtggatactgaa
acggataatttagattcaatgtcagccaatttagtggggatttcatttgcgcttgaaaat
ggtgaagcgtgctatattccacttgggcataagcaaaaagcggagcaaaaacaagtagat
atgtttggtgagcttagcgatacagataatgaaaatagtgatgaattggtaaaaaatcag
ctaaatttgaccgcttgtttaacgcaactcaaaccaattttagaacattgtggcataaaa
aaaattgggcagaacatcaaatatgatttaaccattttttctcactatggcattgagtta
caaggcgttgagtttgatacgatgattgaatcttacacccaaaacagcaccggtcgtcat
aatatggacgatttagccgcccgttatttagggcataagactattccatttgaagagttg
gcgggtaaaggcaaaaatcaacttactttcgataaaattgagattcctaaagctgcggaa
tatgccgcagaagatgctgatgtaacgatgaaactacaccaagtgctatggcaaaaatta
gcacaagagcctgaattggtgaaattgtttaatgaaattgaaatgccgttagttagcgtg
ctttctcgtattgaacgcaatggtgttttgattgacccgaaaaaattattaacacaatcg
gcagaaattgaaaaacgtttaagtgaaatcgagcagctagttcatgcggaagcaggacag
acgtttaatttagcttcaaccaagcagttacaagaaatcttgtttgataaattaggcttg
cctgtgttgaagaaaacgccaaaaggtgcgccatcaaccaatgaagaagtgttagatgaa
ctggctcaacaaggtcatcttgtgccgaaattgttaatggaacatcgtggcttaagtaag
ctgaaatcaacttacacggacaaactgccacaacttattaacaaaaaaacagggcgagtg
catacttcatacaaccaagcggtaacggcaacggggcgactttcttcaagcgatccaaac
ttacagaatattcctatccgcaacgaagagggcagacgaatccgtcaggcattcgttgca
agagaaggctataaaattgttgccgccgactattcccaaattgaactacggattatggcg
catttggccaatgatgaagggatgatcgctgcgtttgcggaaggaaaagatattcaccga
gcaaccgccgcagaaattttcagtgttgcattagaagaggttaccagcgagcaacgccgc
agtgcgaaagcgattaacttcgggctgatttatggaatgtcttcattcgggctttcaaac
caactcggtattggacgagcagaagcccaaaaatatatggagctctattttaaacgctat
ccagccgtgcagcagtttatgacagatattcgtgaagttgccgcagaaaaaggctatgtg
gaaactttgtttggtcgccgtttatatttgcccgatattaaatcaagcaacgctattttg
cgtaaagcagcggagcgagtggcaattaatgccccaatgcaaggcacggcggcagatatt
atcaaagttgcaatgatcggtattgataaagagattcgtggtaatcacgagattaaaatg
attatgcaagttcacgatgaattagtgtttgaagtgaaagcagataagctagaacaatac
agccagctcattaaagctgaaatggaaaaagccatttcgcttaacgtaccactgattgca
gaggtcggaattggcgataattgggacgaggctcattaa
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