Mannheimia pernigra ZY170218: GM695_07650
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Entry
GM695_07650 CDS
T06423
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mann
Mannheimia pernigra ZY170218
Brite
KEGG Orthology (KO) [BR:
mann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mann03016
]
GM695_07650
Enzymes [BR:
mann01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GM695_07650
Transfer RNA biogenesis [BR:
mann03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GM695_07650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Hemolysin_N
Motif
Other DBs
NCBI-ProteinID:
QHB17906
LinkDB
All DBs
Position
complement(1525749..1527725)
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AA seq
658 aa
AA seq
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MFQDNPLLAQLKQQIEASKEYVEGFVKASEKAFGFLECDKKSYFIPPMEMKKVMHGDLVK
AVVKRDGDKEQVEIDTLLEPMLDRFIAQVHLNKEGKLQLSVDHPSIKQHIPANTHKKVTE
KLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKENDNFAPWWVTLARHEQPCEPVANEKS
YELHDELEREDLTHLYFTTIDSPSTQDMDDALFIEPIKENNAQIGWCLAVAIADPTAYIP
EDSEIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVAFIETDLEGNLTK
EAKFTLAWVESKEKLAYDDVSDYLEGSVNAWQPTSEKTKQQIDWLHQFTQARIKWRTNNA
LLFKEQGDYAFELNEDGSVKDIHIEYRRSSNQMIEESMIIANISCAQFLSKYAKTGIFNT
HSGFVPKNYELVKSFLLQTLATDENRNELEERYSAERLATLDGYCQMQRDIQDFPEKFLE
LRLRRYLNFAEFKSDVAPHFGLGISHYATWTSPIRKYGDMVNHRLIKQVLLNQEVTAIDE
SVLIRLQEARRQNRLVERDITDWLYARYLFPMVAQAVEFECEIADVSRGGLRAKVIKNGA
QIFVPFSSLHDNKEEMEYRQEELALYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccccttttagctcaactcaaacaacaaattgaggcaagcaaagaa
tatgtagaaggctttgttaaagcctcagaaaaagcatttggttttttagaatgtgataag
aaaagctatttcattccaccaatggaaatgaaaaaagtaatgcacggtgatttagttaaa
gctgtggtaaaacgtgatggtgataaagaacaagtagaaattgatactctacttgagcca
atgctcgacagatttattgctcaggtgcatttaaataaagaaggaaaattgcaattatcg
gtcgatcatccaagcattaagcaacatattcctgccaacacacacaaaaaagtgactgaa
aaattagaaaacggagattgggttgttgcccaactaaaaacgcaccccttgcgtgatgat
cgctttttctttgctcaagtaactcaatttatttgtaaagaaaatgataactttgccccg
tggtgggtaacgcttgctcgccacgagcagccttgtgaacctgttgctaatgaaaaaagt
tatgaattgcacgatgaattagaacgtgaagatttaactcacctttatttcaccacgatt
gatagcccaagcacacaagatatggacgatgctttattcatcgaacccatcaaagaaaat
aacgcacaaattggctggtgtttagccgtggcaattgccgatccaaccgcttatattcct
gaagattccgagattgaaaaagctgctcgccaacgttgttttactaactatttacctggt
tttaatattccaatgttaccacgggagttgtctgatgatctctgctcactcgtaccgaat
gaaaaacgacctgccttagtcgcttttattgagaccgatttagagggtaacttaactaaa
gaagcaaaattcactttagcttgggtagaatctaaagagaagctagcttatgatgatgtg
tctgattaccttgaaggctccgtaaatgcgtggcagcctacctcagaaaaaacgaaacag
caaattgattggttacatcaatttacccaagctcgtataaaatggcgtacaaacaatgca
cttttatttaaagagcagggggattacgcatttgaattaaatgaagatggttcggtgaaa
gatattcatattgaatatcgccgaagctcaaatcaaatgatcgaagaatcaatgattatt
gccaacatcagctgtgctcaattcttaagcaaatatgcaaaaacaggcatattcaacaca
cattcaggatttgttccgaaaaactacgagttggttaaatcattcttactacaaacctta
gccacagacgaaaaccgtaatgaactggaagaacgctattctgctgaacgcttagcgaca
ttggacggctattgtcaaatgcaacgtgatattcaagactttccagagaagtttttagaa
cttcggttacgtcgctatttaaattttgctgaatttaaatcagacgttgctccccatttt
ggtttgggtatcagccactatgcaacctggacatcacccattcgtaaatatggtgatatg
gtaaatcatcgtttaatcaaacaagtcttattaaaccaagaggtaaccgcgatcgatgaa
tctgttttaattcgcctacaagaagcccgacgacaaaatcgattagtagaacgcgatatt
accgactggctttatgcacgttatcttttcccaatggtcgcacaagcggtcgaatttgaa
tgtgaaattgcagatgtttcccgtggtggcttgcgtgcgaaagtcataaaaaacggtgct
caaatttttgtgccattctccagcttgcacgacaacaaagaggaaatggaataccgccaa
gaagaacttgcactttatattaaaggtgaaaaagcctatcagatcgggcaagcggtgaaa
gtgaaactcaccgaagtacgcttagaaacccgctcaatcgtaggaaatatcatttaa
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