Mannheimia pernigra ZY170218: GM695_09045
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Entry
GM695_09045 CDS
T06423
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mann
Mannheimia pernigra ZY170218
Pathway
mann03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mann00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GM695_09045 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mann03019
]
GM695_09045 (recQ)
03400 DNA repair and recombination proteins [BR:
mann03400
]
GM695_09045 (recQ)
Enzymes [BR:
mann01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GM695_09045 (recQ)
Messenger RNA biogenesis [BR:
mann03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GM695_09045 (recQ)
DNA repair and recombination proteins [BR:
mann03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GM695_09045 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
HEM4
Hanta_Gn-B
SKI
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QHB18159
LinkDB
All DBs
Position
1818080..1819879
Genome browser
AA seq
599 aa
AA seq
DB search
MNTTAISVLNNVFGYQKFRDGQEEVINAVLENRDCLVIMTTGGGKSLCYQVPALCLEGIT
LVISPLISLMKDQVDQLITHGIEAAYLNSTQMLEEQQLVEQKALSGQLKLLYLSPEKVMT
QGFFHFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLGRLRNTFPSVPLMALTATADPTT
RADILHHLRLHSPHIYLGSFDRPNIRYTVQEKFNPLEQLLKFINKQQGKSGIIYCNSRKK
VEEITEKLSSRNISVMGYHAGMSFEQREFVQNAFQRDDIQIVVATIAFGMGINKSNVRFV
IHFDLPRSIESYYQETGRAGRDDLPSEAMLFYDPSDYSWLQKILLEEPESEQRDIKQHKL
QAIGEFAESQTCRRLVLLNYFGEHKQEDCKNCDICLDPPQKYDGLLDAQKVMSVIYRTGQ
IFGQHHIIAVLRGMNNLKIREHNHEQLSVYGIGKEQSQHYWQNVVRQLIHLGLIYQNIAN
HSALQLTESARPFLRGEKTLQLALPRLGISTTTFMQKQASHRYDKDLFARLRFLRKQIAD
KENIPPYIVFNDATLQEMAEFLPASKIEMLEINGVGERKFERFGQAFMALIKEHQNNRK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaacactaccgcaatttctgttttaaataatgtctttggctatcaaaaattccgagac
gggcaagaagaagtgattaatgctgtcttggaaaatcgtgattgccttgtaattatgaca
actggcggtggaaaatccctttgctatcaagtacctgcactttgtttggaagggattact
cttgttatttcaccactgatttctttaatgaaagaccaagtggatcaactgattactcac
ggcattgaagcagcttatctaaattccactcaaatgcttgaagagcagcaattagtagaa
caaaaagccctatcgggacagttaaaattgctttatctttctccggaaaaagtgatgaca
caaggctttttccactttatttcactctgtaaaattagttttattgcggtagatgaagcc
cattgcgtttctcaatgggggcacgattttcgtcctgaatacacactacttggcagattg
agaaatacatttcctagcgtgccattaatggcattaactgcaacggctgacccaacaaca
cgagcagatattctacaccatttacgcctacattctcctcatatctatctaggcagcttt
gatcgccccaatattcgctatacggtacaagaaaaatttaatccccttgaacaactacta
aaatttatcaataaacagcaaggaaaaagtggcattatttattgtaatagccgtaaaaaa
gtggaagagattacggaaaaactctcctcacgaaatatcagtgttatgggttatcacgca
ggaatgagttttgagcagcgagaattcgtacagaatgccttccaacgagatgatattcaa
attgtagtcgcaactatcgcctttggtatgggaattaataaatcgaatgtgcgttttgtc
atacattttgatttacctcgatcgattgaatcttattatcaagaaacaggcagagctgga
cgagatgatctcccttccgaagctatgcttttttacgatccaagcgattatagctggtta
caaaaaatcctcttagaagagcctgagagcgaacaacgagatattaaacagcataaatta
caagctatcggagaatttgccgaatcgcaaacctgccgccgtttagtcttgcttaattat
tttggcgaacacaaacaagaagattgtaaaaactgtgatatttgcctagatccgcctcaa
aaatatgatggattacttgatgcccaaaaagtaatgtcggtgatttaccgaacaggacaa
atctttggtcaacaccatattattgccgtattgcgaggaatgaataatctgaaaattcgt
gaacacaaccacgaacaactttcagtttatggtatcggaaaagagcaaagccagcactat
tggcaaaatgtggtacgacaactgattcacttagggctgatttatcaaaatattgcgaac
cattcggctctccaattaaccgaaagcgccagacctttcttacgtggtgaaaaaacatta
caactcgcattaccacgtctgggtatttcaaccactacatttatgcaaaaacaagcgagt
caccgttatgacaaagatcttttcgctcgtcttcgtttcttgcgtaaacagattgccgat
aaagaaaatattccgccttatattgtctttaatgatgcgacactacaggaaatggcggaa
tttttacccgcctcaaaaatcgagatgcttgaaataaatggcgttggggaacgaaaattt
gaacgatttggccaagcatttatggcattaatcaaagaacatcaaaacaaccgaaaatag
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