Mannheimia pernigra ZY170218: GM695_09405
Help
Entry
GM695_09405 CDS
T06423
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mann
Mannheimia pernigra ZY170218
Brite
KEGG Orthology (KO) [BR:
mann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mann03021
]
GM695_09405 (rapA)
Transcription machinery [BR:
mann03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GM695_09405 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
NAT10_TcmA_helicase
Flavi_DEAD
DUF3958
Motif
Other DBs
NCBI-ProteinID:
QHB18221
LinkDB
All DBs
Position
complement(1894258..1897164)
Genome browser
AA seq
968 aa
AA seq
DB search
MFLVGQRWLSESENNLGLGIVKAVDHRTVTIHFPAAEEERLYAISAAPLARVRFQAGDRI
SSLDGWQLDVTEVVENQGVAIYLGKRLDNNEDVVLPEMLLDHKISFSKPQDKLFSAQIDR
SDRFALRFRALEHQQAQYQSPLRGLRGVRASLIPHQLYIAKEVGQRLSPRVLLADEVGLG
KTIEAGMILQQQLFSGRAERVLVLVPESLQHQWLVEMLRRFNLKFSLFDEERCGDFDQQD
ENHDHTNENPFESESLVITSLNWLETAPQRAKQVLEANWDLLIVDEAHHLEWSEAQASVG
YQFVEQLAKQIPSVLLLTATPEQLGQESHFARLALLDSDRFYDYHRFVVEQMQYQPVADA
VSTLLSDKPLTNEEQNTIAELLSEQDTEPMFRAINSKKSDENDRLQARQELIRELIDRHG
TSRVLFRNTRQAVKGFPHREYHQISLEMPKQYQNALKVMGMMGSVSQTDLLYPEYLFQRM
NPNAKWTEFDPRIEWLITFLKNHREEKVLVICKQAETAIALEQVLREREAIRSAVFHEKM
SIVERDKAAAYFAQQEEGAQVLISSSIGSEGRNFQFAKDLVLFNLPDSPDLLEQSIGRLD
RIGQKNDIQIYVPCFNLSAQQMLAQWYHQGLNAFEETCPMGTAIFRELNEALQHFLKNPQ
LSEQFNDFLAKTRKRQQQLKTELEKGRDRLLELNSNGGEVAEQLANDIMKEDNNPHLVNF
ALQLFDVIGVEQEDLGEQSIVITPTGYMLVPDFPGLSEEGTTITFDRELALMREDVEFLT
WDHPMIRNGIDLITSGDIGKSAISLLMNNKLPAGTLLLEAIYIVETQAPKGLNLARFLPP
TPIRILVDNKGNNIAPQVPFAGLERQLKPVNKQMANKIAKMARADIEKLIKASEKAVIPQ
VKTVIETAKFEANCKLKAELNRLESLKMVNKNIRSDEVEALEQQLNDTLVQIAMANCRLD
CLRVIVSN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtttttagtcggtcagcgttggctaagtgaatcggaaaataatttaggtttagggatt
gtgaaagcggtggatcatcgcacggtgactattcactttcccgcagcagaagaagagcga
ttatatgcgatttcagccgcacctttagctcgtgtacgatttcaagcaggcgatagaatt
agcagccttgacggttggcagcttgatgtcacagaggttgttgaaaatcaaggcgttgct
atttatttaggaaaacggctagataataacgaagatgttgttttgcccgagatgttgctc
gatcacaaaattagctttagcaaaccgcaagataagcttttctcagcacaaattgatcgc
agtgatcgtttcgcgttacgttttcgagcgttagaacaccaacaggcacaatatcaatcg
ccgttaagaggcttacgaggcgttcgtgcaagtcttatccctcatcaattatacattgct
aaagaagttgggcaacgtttatcgccccgtgttttacttgctgatgaagtgggtttagga
aaaacaattgaagcgggaatgatattacagcaacaactttttagtggcagagctgagcgt
gttttagtgctggtgccagaaagtttacaacatcaatggttagttgaaatgctgcgtcgt
tttaatttgaaattctctttatttgatgaagaacgctgtggagattttgatcagcaagac
gaaaaccacgatcacacaaacgagaatccatttgagagtgaatctttagtgattacctca
ctgaactggttagaaacagcccctcaacgagcaaagcaagtgcttgaggcaaactgggat
ctactgattgttgatgaagcacaccatctggaatggtcggaggcacaagcatcggtaggc
tatcaatttgttgagcagttggcgaaacaaattccatcagtactccttttaactgcaacg
cctgagcagttaggacaagagagccattttgcccgcttagcattattagattcagatcgc
ttttatgattaccatcgttttgtggtggagcaaatgcaatatcagcccgttgcggatgca
gtttctacattactaagcgataagcctttaaccaatgaggaacaaaataccattgcggaa
ctgttaagcgagcaagatactgagccaatgtttcgtgcgatcaatagcaaaaaatcggac
gaaaatgatcgcttgcaggcacgacaagagctaattcgtgagctgatagacagacacggc
actagccgagtgctatttagaaatactcgtcaggcggtgaaaggcttccctcatcgtgaa
taccatcaaattagtttggaaatgccgaagcaataccaaaatgctttaaaagtgatggga
atgatgggtagcgtgagccaaactgatttactttatccagagtatttatttcagcgaatg
aacccaaatgcgaaatggacggaatttgatcctcgcattgaatggctgataacttttttg
aaaaatcatcgagaagaaaaggtgttggtgatttgtaaacaagccgagaccgcaattgct
ttagagcaagtgctgcgtgagcgtgaggcgattcgctctgccgttttccatgaaaaaatg
tcgattgtagagcgtgataaagcggctgcttattttgcgcaacaagaggaaggggcacaa
gttctgattagctcaagtattggttcagaaggacgaaacttccaattcgctaaagattta
gtgttgtttaatttaccagatagccctgatttattggaacagagcattggacgcttagac
cgtattgggcagaaaaatgatatccaaatttatgtgccttgttttaatttatcggctcaa
cagatgttggcacaatggtatcatcaaggtttaaatgcctttgaagaaacttgcccgatg
ggaaccgctattttccgtgagttgaatgaagcactgcaacatttcctgaaaaatccgcaa
ctttcagaacaatttaacgactttttggcgaaaacccgtaaacgccaacaacaattaaaa
acagaattagaaaaagggcgagatagattattagaactcaactctaatggtggagaagtt
gcggagcagctcgccaatgacattatgaaggaagataataatccgcatttagtgaatttt
gctttacagttatttgatgtgattggtgttgagcaggaagatttaggcgagcagagcatt
gtgattacgccaacagggtatatgctagtgcctgattttccaggtttatcggaagaggga
acaacaattacctttgaccgtgaattagccttaatgcgtgaagacgtggaatttctcact
tgggatcaccctatgatccgaaatggtattgatttaattacctcaggcgatattggaaaa
tcagctatttcattgctgatgaataataaattacccgcaggcaccttgctgcttgaggca
atttatattgtggaaactcaagcaccaaaaggtttgaatttagctcgtttcttgccaccc
acacccattcggattttagtggataataaaggcaacaatatcgccccacaagtgccgttt
gcaggacttgagcgtcagttaaagcctgtcaacaaacagatggcgaataaaattgcgaaa
atggctcgagcagatattgaaaaattgattaaagcgagcgaaaaagcggtgattcctcaa
gttaaaacggtgattgaaacggctaaatttgaagcaaattgcaaattaaaagcagaatta
aaccgcttggaatcgcttaaaatggtgaataaaaacattcgatctgatgaagttgaggca
ttagagcagcaattaaatgacacattagtacaaatagcaatggcgaattgccgcttggat
tgcttgcgtgtgattgtaagtaattaa
DBGET
integrated database retrieval system
