Mannheimia pernigra ZY170218: GM695_09420
Help
Entry
GM695_09420 CDS
T06423
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mann
Mannheimia pernigra ZY170218
Brite
KEGG Orthology (KO) [BR:
mann00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mann03009
]
GM695_09420 (rlmD)
Enzymes [BR:
mann01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GM695_09420 (rlmD)
Ribosome biogenesis [BR:
mann03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GM695_09420 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
Methyltransf_11
RrnaAD
MTS
Methyltransf_4
Ubie_methyltran
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_23
DOT1
Methyltransf_12
Methyltr_RsmB-F
Methyltransf_15
FtsJ
Kp4
NMD3_OB
Motif
Other DBs
NCBI-ProteinID:
QHB18224
LinkDB
All DBs
Position
1899190..1900512
Genome browser
AA seq
440 aa
AA seq
DB search
MAIFYSDKSAKKSQKTTVYQTAQIQDLDYQGLGIAKINGKMWFIENTLPGEQVEFKVLEE
KRQYGRGQAVKCFKKSADRRTPSCELYNKCGGCQMQHISLNLQREAKQNALVQRLQKLQV
NKIHFQPMIVGKDKGYRRRTKLSIAIQNGKTVMGFRLQNSHQIIPLAHCEVLVKPLSNLL
PKLQCLVAGWQNKKKLGHIELVQADNTTALFLRHLGQLSAQDRDIFLQFAKQNALSAFLM
CQENHIDHLYGKLPYYEIQGLKLHFSVRDFIQVNTELNTQMVEKAIEWLELSDDDRVLDL
FCGMGNFTLPIAQHVKSVVGVEGVEPMVEQARANAIASGLKNVEFYQTNLDEPFADKPWA
KESFNKVLLDPARNGALFCLDHLVALNPERIVYVSCNPATLVRDAEKLLQCGYRLEKVAM
IDMFPHTGHLESISLFLKDN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggctattttttattccgataaatctgcaaaaaaatcacagaaaacgactgtttaccaa
actgcacaaattcaagatttagactatcaaggcttaggcattgctaaaattaatggcaaa
atgtggtttattgaaaataccttgcctggcgagcaagtcgaatttaaagtgctggaggaa
aaacgccagtatgggcgagggcaagcggtgaaatgtttcaaaaaatcggcagatcgtaga
acgccaagctgtgagctttataacaaatgcggaggctgccagatgcagcatatttccctt
aatttgcaacgagaggctaaacaaaacgctttggttcaacgcttgcagaaattgcaagtc
aacaagattcattttcagccgatgattgtaggtaaggataaaggctatcgccgccgcaca
aagctcagtattgctattcaaaatggaaaaaccgtaatgggttttcgcttgcaaaattct
catcaaatcataccgcttgcacattgcgaagtattggttaagccgctttccaatctctta
cctaaactgcaatgccttgtagcaggctggcaaaacaagaaaaaactcggacatattgaa
ttggtgcaagcagataacactaccgccctatttttacgccatttagggcaattatcggca
caagatcgtgacatttttcttcaatttgccaaacagaacgctctttctgcttttttgatg
tgtcaagaaaatcacattgaccatctttatggcaaattgccttattatgaaattcaaggc
ttaaaattgcatttttcggttcgagattttattcaagtcaataccgagctgaatacccaa
atggtggagaaagccatcgaatggcttgagctttccgatgatgatcgtgtgttagatcta
ttttgtggaatgggcaattttacgcttccaatcgcccaacatgtaaaatcggttgttggc
gtggaaggcgttgagccgatggtggaacaagctcgtgcgaatgcaattgcaagcggtcta
aaaaacgtggaattttaccaaaccaacctagatgaaccctttgctgataaaccctgggcg
aaagagtcttttaataaagtcctgctcgacccagctcgcaacggggcattgttctgctta
gatcaccttgtcgccctcaaccccgagcgaattgtttatgtatcttgcaaccctgccaca
ctcgtgcgagatgcagaaaagctgctgcaatgtggctaccgcttagaaaaagtggcaatg
attgatatgttcccccacacagggcatttagaatccatttcgttgtttttaaaagataat
tag
DBGET
integrated database retrieval system
