Mannheimia pernigra ZY170218: GM695_10045
Help
Entry
GM695_10045 CDS
T06423
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mann
Mannheimia pernigra ZY170218
Pathway
mann03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mann00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GM695_10045 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mann03400
]
GM695_10045 (recD)
Enzymes [BR:
mann01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GM695_10045 (recD)
DNA repair and recombination proteins [BR:
mann03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GM695_10045 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
AAA_11
UvrD_C_2
UvrD-helicase
Helicase_RecD
SLFN-g3_helicase
DEAD
AAA_22
SH3_13
nSTAND3
UvrD_C
ResIII
TrwB_AAD_bind
AAA
ATPase
Imm71
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QHB18329
LinkDB
All DBs
Position
complement(2016128..2018095)
Genome browser
AA seq
655 aa
AA seq
DB search
MLNLLLELKKEKIISDLNYQFACFIESKQKQYNYSEKQSDLALLLAALISYQVGLGHTAL
RLNSLTLSMLFELNAKPQYHLLLEKILQKIGKISPLEWQCILKDHIAFSDSPEKIAPMLF
QNGLLYFYRYWQAEHQVAVYLQQAVNFSEKLPNTVLNNKIIQQLFDNHTSPQQDIDWQKV
AIATALEKQFTLISGGPGTGKTTTVVKLLLGHQLKQIEQNAPFLQIALAAPTGKAASRMK
ESIESKLAEENKLSPAIIKSIPTEAMTIHRLLGARPLTDNTKFNAKNPLHYDLVVLDEAS
MIDLSMMAKIVQALKPTARLIMLGDKDQLASVEAGSIIGELGSFLEYGYSQKHCDYLNAV
TGYQINAGNALPICDSLSHLKHSYRFGEKIWIGELANAVNEQKINRSWDIFSQYKNSGKL
ENIRYPETKEMLDKSNWVEKSVKMIVDKAIELYRDYLQAVKQREEQPQSISIKTIFDKFQ
KVRFLSALRVSELGVERLNIAIAEGLRKAGLVKFNHSRDRYIGKPIMITENMPSNKMASG
DIGIILPDENGETSVYFDSLQADNQYHRLPLSRISNYEAAYIMTVHKSQGAEFEHTILIL
PLSISPVLTKELIYTAITRAKDKFTLFGNEKVWKYSVGTKTERQSGLKEQLINKI
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatttattacttgaattaaaaaaagagaagattatttctgatttaaactaccaa
tttgcttgttttattgagagtaaacaaaaacaatataattattcagagaagcaaagcgat
cttgcactattgttggcggcattgatctcatatcaagttggtctagggcatacagcattg
cgattaaattctctcacgctttcaatgctgtttgaactcaacgcaaagcctcaataccac
cttttgcttgagaaaattttgcaaaaaattggaaaaatttcaccgcttgaatggcaatgt
atcttgaaggatcatattgcttttagcgattcgcctgaaaaaattgctcctatgctcttc
caaaatggattactttatttttatcgttattggcaggcagaacaccaagttgcggtttat
ctacaacaagcggtcaacttttctgaaaaattacccaatacagtattaaataataaaatc
attcaacagttatttgacaatcacacaagcccacaacaagacattgattggcaaaaagtg
gctattgcaaccgcacttgaaaagcagttcaccttgatttctggtgggccaggaacaggt
aaaacgactacagttgtaaaattattgctcgggcatcagcttaagcagatagagcaaaat
gccccttttctacaaattgccttagctgccccaacaggaaaagccgcatcaagaatgaaa
gagtcgattgagagtaagttagcagaagaaaataagctatcgcctgccataatcaaatcc
attccaactgaggcaatgacgattcatcgcttacttggtgccagaccattaacagataac
acaaaattcaatgcgaaaaaccctctgcattatgatttggtggtactagatgaagcttca
atgattgatttatctatgatggcaaaaattgtacaagcacttaagccaactgctcgtttg
attatgctaggcgacaaagatcagctcgcctcggtggaagctggatctattatcggtgaa
ctcggttctttcttagaatatggttatagccaaaagcattgcgattatttaaacgccgtt
acaggctatcagataaatgcgggtaatgcgttgcctatttgtgattcgctctctcattta
aaacacagctaccgatttggtgaaaaaatatggattggggagttagcaaatgcggttaat
gagcaaaaaattaatcgctcttgggatatttttagccaatataaaaatagcgggaagttg
gaaaatattcgctatccagaaacgaaagagatgttagataaatcaaactgggtagagaaa
agtgtaaaaatgatagttgataaagcgattgagctttaccgtgattatttgcaagcagtt
aaacaacgagaagagcagcctcaatcaataagtatcaaaacgatttttgacaaatttcaa
aaagtgcgttttctttctgctttacgtgtgagtgaattgggtgttgaacgattgaatatt
gcaattgcggaggggctgcgaaaagctggattagttaaatttaatcatagtcgagatcgc
tatatcggcaaaccgattatgattaccgaaaatatgccatcaaataaaatggctagtggc
gatattggcattattctgccagatgaaaatggagagacaagcgtttattttgattcacta
caagcagacaaccaatatcatcgcttaccgctaagtcgcatttcaaattatgaagcagct
tatataatgacagtgcataaatcacaaggagcggaatttgaacatactattttaattttg
ccactttccatatcacctgtcttaactaaagaattgatttacacagcaattacccgtgct
aaagataaatttacactatttggcaatgaaaaagtatggaaatacagtgttggtacgaaa
acagaaagacaaagtggactaaaagaacaattaattaacaaaatttga
DBGET
integrated database retrieval system
