Mirounga angustirostris (Northern elephant seal): 123834711
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Entry
123834711 CDS
T11530
Symbol
SCN5A
Name
(RefSeq) sodium channel protein type 5 subunit alpha
KO
K04838
voltage-gated sodium channel type V alpha
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano04261
Adrenergic signaling in cardiomyocytes
mano04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
123834711 (SCN5A)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
123834711 (SCN5A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mano04040
]
123834711 (SCN5A)
Ion channels [BR:
mano04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
123834711 (SCN5A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
CcmD_alt
FraC
Motif
Other DBs
NCBI-GeneID:
123834711
NCBI-ProteinID:
XP_064446074
LinkDB
All DBs
Position
Unknown
AA seq
2016 aa
AA seq
DB search
MADFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGSAASQESREGLPEEEAPRPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPV
RRAAVKILVHSLFSMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTALNDTNGSVEANGQV
WESLDRYLSKPENYLLKNGTSDVLLCGNSSDAGTCPEGYRCLKAGDNPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVTTHERRSKRRK
QMSSGTEECGDDRFPKSDSEDGPRAMNRLSSMHGLSRTSMKPRSSRGSIFTFRRRDLGSE
TDFADDENSTAGDSESHRTSLLVPWPLRRPSAQGQLSPGTSAPGHALNGKRNSTVDCNGV
VSLLGAGNPETTSPGSHLLRPVILDRPPDTTTPSEEPGRPQILNTQAPCMDGFEEPGERQ
RALSAVSVLTSALEELEESHRKCPSCWNRFAQRYLIWECCPLWMSIKQRVKFMVMDPFAD
LTITMCIVVNTLFMALEHYNMTTEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQG
WNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYSEQRHRISDSGLLPRWHMMDFFHAFLIIFRILCGE
WIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDDDGEMNN
LQLALARIQRGLRFLKRTTWDFCCGLLQRRPQKPAALTARGQLPSCVATSSPPLPPESEK
APLARKETRFEEDKRPGQGTPGDTEHVCVPIAVAESDTDDQEEDEENSLGTEEESSKQQE
SQPVSGSPEALPEPRAWSQVSETASSEASVAQADWRRQRKAEPPAPGCSETHEDSYSEGS
TADMTNTADLLEQIPDLGEDVKDPEDCFTEGCVRRCPCCTVDTTQGPGKVWWRLRKTCYR
IVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLKWVA
YGFKKYFTNAWCWLDFLIVDVSLISLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGM
RVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTDGDLPLNYTIVNN
KSDCESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQPQW
EYNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKMRRDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPLNKYQGFLFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKVNILA
KINLLFVAIFTGECIIKMTALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFFSPTL
FRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMANFAY
VKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNNNGSRGN
CGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEIWEKF
DPEATQFIEYSALSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAFTKRV
LGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATVIQRAFRRHLLQRSM
KHASFLFRQQAGSSGLSDEDAPEQEGLIAYMMNENFSRRLDPPSSSSVSSTSFPPSYDSV
TRATSDNPQVRVSDYSRSEDLADFPPSPDRDRESIV
NT seq
6051 nt
NT seq
+upstream
nt +downstream
nt
atggcagacttcctgttacctcggggcaccagcagcttccgcaggttcacccgggagtcc
ctggcggccatcgagaagcgcatggcggagaagcaagcccgaggttcggccgcctcgcag
gagagccgggaagggctgcctgaggaggaggctccccggccccagctggacctgcaggcc
tccaaaaagctgccagatctctatggcaacccgccccgagagctcatcggggagcccctg
gaggacctggaccccttctatagcacccaaaagaccttcattgtgctgaataaaggcaag
accatcttccggttcagtgccaccaatgccttgtatgtcctcagtcccttccaccctgtc
cggagagcagctgtgaagattttggttcattcgctgttcagtatgctcatcatgtgcacc
atcctgaccaactgcgtgttcatggcccagcacgaccctccaccctggaccaagtatgtc
gagtacaccttcactgccatttacacctttgagtctctggtcaagattctggctcgaggc
ttctgcctgcatgcgttcaccttcctccgggacccatggaactggctggacttcagtgtg
attgtcatggcatacacaactgaatttgtggacctgggcaatgtctcagctttacgtacc
ttccgagtcctccgggccctgaaaactatatcagtcatttcaggtctgaagaccatcgtg
ggggccctgatccagtctgtgaagaagctggccgatgtgatggtcctcacggtcttctgc
ctcagcgtcttcgccctcatcggcctgcagctcttcatgggcaacctgaggcacaagtgt
gtccgcaacttcacggcactcaacgacaccaacggctctgtggaggccaacggccaggtc
tgggagtcactggaccgctacctcagcaaaccagaaaattacttgctgaagaacggcacc
tccgatgtgttactgtgtgggaacagctctgacgccgggacatgccccgagggttaccgg
tgcctaaaggcaggggacaaccctgaccacggctacaccagcttcgactcctttgcctgg
gccttccttgcgctcttccgcctcatgacgcaggactgctgggagcgcctctaccagcag
accctgaggtctgcagggaagatctacatgatcttcttcatgcttgtcatcttcctgggc
tccttctacctggtgaacctgatcctggctgtggttgccatggcctacgaggagcaaaac
caagccaccatcgctgagaccgaggagaaggaaaagcgcttccaggaggccatggagatg
ctcaagaaagagcatgaggccctcaccatcaggggtgtggacaccgtgtcccgcagctcc
ttggagatgtcccctttggccccagtaaccacccatgagagaagaagcaagaggagaaaa
caaatgtcttcggggacagaggagtgtggagatgacaggttccccaagtctgactcagag
gatggtcccagagcaatgaatcgtctgagcagcatgcacggcctcagccggacctccatg
aagccgcgctccagccgcgggagcattttcacctttcgcaggcgagacctgggttcagag
acggattttgcagatgatgaaaacagtacagcgggggacagcgagagccaccgcacgtca
ctgctggtgccctggcctctgcgccggcccagtgcccagggacagctcagtccagggacc
tcggctcccggccacgccctcaatggtaaaagaaacagcaccgtggactgcaacggggtg
gtctccttgctgggggcgggcaaccctgagaccacctccccagggagccacctcctccgc
cctgtgatcctggatcgccccccagacacgaccacaccgtcagaggagccgggcaggccc
cagatcctgaacacccaggctccatgtatggatggcttcgaggagccaggagagcggcag
cgggccctcagtgccgtcagtgtgctcaccagcgccctggaagagctggaagagtctcac
cgcaaatgtccatcatgctggaaccgctttgcccagcgctacctgatctgggagtgctgc
ccgctgtggatgtccatcaagcagagagtgaagttcatggtcatggacccattcgccgac
ctcaccatcaccatgtgcatcgtggttaacacactcttcatggcactggagcactacaac
atgacaactgaattcgaggagatgctgcaggttggaaacctggtcttcacagggatcttc
accgcagagatgaccttcaagatcattgctctggacccctactactacttccagcagggc
tggaacatcttcgacagcatcattgtcatcctgagcctcatggagctgggcctgtcccgc
atgggcaacctatcagtgctgcgctccttccgcctgctgcgggtctttaagctggccaaa
tcatggcccaccctgaacacccttatcaagatcatcggaaactcagtgggggcgctgggg
aacctgacactggtgctggccatcatcgtgttcatcttcgctgtggtgggcatgcagctc
tttggcaagaactactcagagcagaggcaccgcatcagtgactcaggcctgctgccccgc
tggcacatgatggacttcttccatgcctttctcatcatcttccgaatcctctgtggggag
tggatcgagaccatgtgggactgcatggaggtgtctgggcagtcactatgcctgcttgtc
ttcttgcttgttatggtcattggcaaccttgtggtcctgaacctcttcctggctctgctg
ctcagctccttcagcgcagacaacctcacagcccctgacgatgatggggagatgaacaac
ctccagctggccctggcacgcatccagcgcggcctgcgcttcctcaagcggactacctgg
gacttctgctgtgggctcctacagcggcggccccagaagcccgcagccctcaccgcccgt
ggccaactgcccagctgcgttgccacctccagccccccactgcccccggagtcagagaag
gcgcctctggcccgcaaggagacacggtttgaggaagacaagcggccaggccagggcacc
cccggggatacagagcatgtgtgtgtgcccattgccgtggctgagtcagatacagatgac
caagaggaggatgaggagaacagcctgggcacagaggaagagtccagtaagcagcaggaa
tcgcagcctgtttccggcagcccagaggccctcccagagcccagggcctggagccaggtg
tcagagaccgcctcctctgaggccagtgtggctcaggcagactggcggcggcagcggaaa
gcggagcccccggccccagggtgcagtgagactcacgaggacagctactcagaggggagc
acagcagacatgaccaacacggctgacctcctggagcagatccctgacctgggcgaggat
gtcaaggacccagaggactgcttcactgaaggttgtgtccggcgctgtccctgctgcact
gtggacaccacgcagggccccgggaaggtctggtggcgactgcgcaagacgtgctaccgc
atcgtggagcacagctggttcgagacgttcatcatcttcatgatcctgctcagcagtgga
gccctggccttcgaggacatctacctggaggagcggaagactatcaaggttctgctcgaa
tatgccgacaagatgttcacctacgtcttcgtgctggagatgctgctcaagtgggtggcc
tacggctttaagaagtacttcaccaacgcctggtgctggctggacttcctcatcgtggat
gtctccctgatcagcctggtggccaacaccctgggctttgccgagatgggccccatcaag
tcactgcggaccttgcgtgcactccgacctctgcgagccctgtcacgatttgagggcatg
agggttgtggtcaatgccctggtaggcgccatcccatccatcatgaatgtcctcctcgtc
tgcctcatcttctggctcatcttcagcatcatgggcgtgaacctctttgcggggaagttt
gggcggtgcatcaaccagactgacggagacctgcctttgaactacaccatcgtgaacaac
aagagtgactgtgagtctttcaacgtgactggcgaattgtactggaccaaggtgaaagtc
aactttgacaacgtgggggccgggtacctggcccttctgcaggtggcaacatttaaaggc
tggatggacattatgtatgcagctgtggactccagggggtatgaagagcagccccagtgg
gaatacaacctctacatgtacatctacttcgtcattttcatcatcttcgggtctttcttc
accctgaaccttttcatcggtgtcatcatcgacaacttcaaccaacagaagaaaaagatg
cgtagagacatcttcatgaccgaggagcagaagaagtactacaacgccatgaagaagctg
ggctccaagaagccccagaagcccatcccgaggcctctgaacaagtaccagggcttcctg
ttcgacattgtgaccaagcaggccttcgacgtcaccatcatgttcctcatctgcttgaac
atggtgaccatgatggtggagacagatgaccagagccccgagaaggtcaacatcttggcc
aagatcaacctgctctttgtagccatcttcacgggcgagtgtatcatcaagatgaccgcc
ctgcgccactattacttcaccaacagctggaacatcttcgactttgtggttgtcatcctc
tccattgtgggtactgtgctctcagacatcatccagaagtacttcttctccccaacgctc
ttccgagtcatccgtctggcccgaatcggccgcatcctcaggctgatccgaggggccaag
gggatccgcacactgctctttgccctcatgatgtccctgcccgccctcttcaacatagga
ctgctgctcttcctcgtcatgttcatctactccatcttcggcatggccaacttcgcttac
gtcaagtgggaggctggcatcgacgacatgttcaacttccagaccttcgccaacagcatg
ctgtgcctcttccagatcaccacatcagctggctgggatggcctcctcagccccatcctc
aacacaggacccccttactgtgaccccaatctgcccaacaacaatggctcccgggggaac
tgtggaagcccagccgtgggcatcctcttcttcaccacgtacatcatcatctccttcctc
atcgtggtcaacatgtacatcgccatcatcctggagaacttcagcgtggccacagaggag
agcactgagcctctgagcgaggatgacttcgacatgttctacgagatctgggagaagttc
gacccggaagccacccagttcatcgagtattcggccctgtccgacttcgccgatgccctg
tccgagcctctccgcatcgccaagcccaaccagataagcctcatcaatatggacctgccc
atggtgagcggggaccgtatccactgcatggacatcctctttgccttcaccaagagggtc
ctgggtgagtctggggagatggacgccctgaagatccagatggaggagaagttcatggcg
gccaacccgtccaagatctcctacgagcccatcaccaccacgctccggcgcaagcacgag
gaggtgtcggccaccgtcatccagcgggccttccggaggcacctgctgcagcgctccatg
aagcacgcctccttcctcttccgccagcaggcaggcagcagcggcctctctgatgaggat
gccccggagcaggagggcctcatcgcctacatgatgaatgagaacttctcccggcgcctt
gacccgccctccagctcctctgtctcctccacgtccttcccgccctcctatgacagcgtc
accagggccaccagcgataacccccaggtgcgggtgtccgactacagccgcagcgaggat
ctcgccgacttccccccgtccccagacagggaccgcgagtccatcgtgtga
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integrated database retrieval system
