Mirounga angustirostris (Northern elephant seal): 123837543
Help
Entry
123837543 CDS
T11530
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123837543 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mano01007
]
123837543 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mano03016
]
123837543 (VARS2)
Enzymes [BR:
mano01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
123837543 (VARS2)
Amino acid related enzymes [BR:
mano01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123837543 (VARS2)
Transfer RNA biogenesis [BR:
mano03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123837543 (VARS2)
Prokaryotic type
123837543 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
123837543
NCBI-ProteinID:
XP_045722476
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MSHAAPGASPRGFLSPRRTRWSRRRRPLDRRAANGAEPATAHVPSGTPPPCPARLAGHVP
GLGSLVPSPFAVAAAAGRPGIAAGWPDLGPFQALLMPHLPLASFRSPFWGLRPSQGLPRF
HPLSTHSKSHGSSISRRNHEAKQKRQREKQAALEAGIARKSKSAAESSKAWTPKEVVVYE
IPTEPGEKKDVSGLLPPAYSPRYVEAAWYSWWVREGFFKPEYQMKLPQATGETFSMCIPP
PNITGSLHIGHALTVAIQDALVRWHRMCGDQVLWVPGSDHAGIATQAVVEKQLWKERGVR
RHELSREEFLREVWKWKEEKGGEISEQLQALGASLDWDRECFTMDAGSSVAVTEAFVRLY
EAGLLYRSQQLVNWSCALRSAISDIEVESRPLPGRTELRLPGCPTPVSFGLLFSVAFPVD
GEPGEDAEVVVGTTRPETLPGDVAVAVHPDDSRHAHLHGRQLRHPLTGQLLPLITDCAVQ
PHVGTGAVKVTPAHSPADAELGARHGLSPLSVISEDGTMTSLCGDWLQGLHRFVAREKIM
SALTERGLFRGLQNHPMVLPICSRSGDVVEYLLKSQWFVRCQELGARAAQAVESGALELS
PSFHQKNWQHWFSHIGDWCVSRQLWWGHRIPAYLVVEEHTKGDEEDCWVVGRTEAEARKI
AAELTGKPGAELTLQRDPDVLDTWFSSALFPFAALGWPQETPDLARFYPLSLLETGSDLL
LFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGRKMSKSLGNVLDPRDIISGVELQVLQ
AKLRDGNLDATELVIAAAAQRKDFPHGIPECGTDALRFALCSHGALGGDLHLSVSEVLSS
RHFCNKIWNALRFILNALGEQFVPQPAEELSPSSPMDAWILSRLAHTARECERGFLAREL
SLTTHALRHFWLHSLCDVYLEAVKPVLSRSPHPPGPPQALFSCADTGLRLLAPLMPFLAE
ELWQRLPPRPGGNSAPSISVAPYPTARSLGHWHQPELEQRFSRVQEAVQALRALRATYQL
TKARPRVLLQSSEPGEQGLFEAFLEPLGTLGHCGAVGLLPPGVAAPSGWAQAPLSDTTQM
YMELQGLVDPQTHLSLLAARRHKLQKQLDGLMAWTPSEGEAETKRQQRLSSLQLELSKLD
KAASHLRQLMDACPSPGEL
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgcggccccgggcgcctccccgcgaggcttcctctctcctcgaaggacccgc
tggtcgcggcgccggcggccattggaccggagggcggcgaatggggccgagccggctacc
gcgcatgtcccgagcgggaccccgcctccctgccccgcgcggctcgcgggtcacgttccg
gggttgggttcgctggttccctccccgtttgctgttgccgcggccgcggggcgccctggg
atagcggcgggctggcccgatcttggccctttccaagcactcctgatgcctcatttgcct
ttggcctcttttcgatcaccattctgggggctgaggccctcacagggcctccccaggttc
catcccctctctacccactcaaagtcccatggatcctccatctcccggaggaaccatgaa
gccaaacagaagcgccagcgagagaagcaggcggcgctggaggctgggatagcccgaaag
agcaagtcagctgcagaatccagtaaggcctggactcctaaggaggtggtggtgtatgaa
atccccacggaacctggtgaaaagaaagatgtctccgggctcctgcctcctgcatacagc
cctcggtatgttgaggctgcctggtactcttggtgggtgcgagagggcttcttcaaacca
gagtatcagatgaagctgccccaggctacaggggagaccttttccatgtgtatcccacct
cccaatatcaccggctccctacatatcgggcatgcactgacggtggccatacaggatgcc
ctggtgcgctggcaccggatgtgtggggatcaggtgctgtgggtccctggctccgatcac
gcaggaattgctacacaggctgtggtggagaagcaactgtggaaggagcgaggagtgagg
agacatgagctgagccgggaggaattccttagggaggtgtggaagtggaaggaggagaaa
ggtggagagatcagtgagcagctccaagctctgggggcctccctagactgggaccgagag
tgcttcactatggatgctggctcctcggtggctgtgaccgaagcttttgtgcgactctac
gaggcggggttgttgtaccggagccagcagcttgtcaactggtcctgtgctttaagatca
gccatctcggatattgaggtggagagccggcccctgcctggccgcacggagcttcgactg
cctggctgccccacccctgtgtcttttggcctccttttttctgtggccttccctgtggat
ggagagcctggtgaggacgcagaggttgtggtgggaaccacaaggccagagacattacct
ggagacgtggctgtggctgttcatcctgacgactcccgacacgcgcatctgcatgggcga
cagcttcgtcaccccttgaccgggcagcttctccccctcatcacagactgtgctgttcag
ccacatgtgggcacaggggcagtgaaggtgactccagcgcatagccctgcagatgctgag
ctgggggcgcggcacggcttgagccccctgagcgtcatctcagaggatgggaccatgacc
tccctctgtggggactggctacagggtcttcaccgatttgtggcccgagaaaagattatg
tctgcgctgacagagcggggcctgttccggggcctccagaaccaccccatggtgcttcct
atttgcagccgttctggggacgtggttgaatacctgctgaagagccagtggtttgtccgc
tgtcaggagctgggggcccgagctgcccaggctgtggagtcaggggctctggagctcagt
ccatccttccaccagaagaactggcagcactggttttcccacatcggggactggtgtgtc
tcccggcagctgtggtggggccatcggattcccgcctacctggtggtagaggagcacacg
aagggtgatgaggaggactgttgggtggtcgggcggacagaggctgaggccagaaaaata
gctgcagaactgacagggaaaccaggagcagagctgaccctgcagagggatcctgatgtc
ctggacacatggttctcttcagctcttttcccctttgctgccctgggctggccccaagag
accccagaccttgctcgtttctaccccctgtcacttttggaaacgggcagtgaccttctg
ttgttctgggtgggccgcatggtcatgttggggacccagctcacagggcagctccccttc
agcaaggtgcttcttcattccatggttcgggacaggcagggccggaagatgagcaagtcc
ctggggaatgtgttggacccacgagacatcatcagtggggtggagctgcaggtgctgcag
gcgaagctgagggatgggaacttggacgccacagagctggtgatcgcggccgcagcgcag
agaaaggacttccctcatgggatccctgagtgtgggacagatgccctgcggtttgccctg
tgctcccacggggccttggggggcgatttgcacctgtctgtctctgaggtcctgagttcc
cggcatttctgcaacaaaatctggaatgccctgcgctttatcctcaatgccttaggggag
caattcgtaccccagcctgcagaggagctgtccccctcgtctccgatggatgcctggatc
ctgagccgtcttgcccatactgcccgggagtgtgagcgaggcttccttgctcgagagctc
tcactcactacgcatgccctgcgccacttctggctgcacagcctctgtgatgtctacctg
gaggctgtgaagccagtgctgtcgcgctcgccccatcccccgggcccccctcaggccctg
ttctcctgtgccgacaccgggctccgcctcctcgccccactgatgcccttcctggctgag
gagttgtggcagaggctgccgcccaggcctggcggcaactctgcccccagcatctccgtt
gccccctaccccactgcccgcagcctggggcactggcaccagcccgagctggagcagcgc
ttctcccgggtccaggaggctgtgcaggcactgagggctctccgagccacataccagctc
accaaggcccggccccgagtgctgctgcagagctcagagcctggagagcagggcctcttc
gaggccttcctggagcccctgggcaccctgggccactgtggggccgtgggcctcttaccc
ccaggtgtggcggcgccctccggctgggcccaggccccactcagtgacaccactcagatg
tacatggagctgcagggcctggtggacccccagacccatctgtctctgctggctgcccga
agacacaagttgcaaaagcagcttgatggcctcatggcctggaccccatcagagggagag
gcagagactaagaggcagcagaggctttcttccctccagttggaattgtcgaagctggac
aaggcggcctctcacctccggcagctgatggatgcgtgtcccagccccggggagctctga
DBGET
integrated database retrieval system
