Mirounga angustirostris (Northern elephant seal): 123837570
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Entry
123837570 CDS
T11530
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X4
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123837570 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mano01007
]
123837570 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mano03016
]
123837570 (VARS1)
Enzymes [BR:
mano01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
123837570 (VARS1)
Amino acid related enzymes [BR:
mano01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123837570 (VARS1)
Transfer RNA biogenesis [BR:
mano03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
123837570 (VARS1)
Prokaryotic type
123837570 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
123837570
NCBI-ProteinID:
XP_045722539
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MSSRTAPARAGGARPPAPGPAGPETLVVTKGGKHVGAHGPAAVAGSWGRLENRPPSPPGR
VLGSGRQAGPPSAGLRPRGGCPARRDHLPPVFFHLVRTPCVTMSILYVSPHPDAFPSLRA
LIAARYGEAGEGPGWGGAHPRICLQPPPTSRTPFPPPRLPALEQGPGGLWVWGATAVAQL
LWPAGLGGPGGSRAAVLVQQWVSYADTELIPAACGATLPALGLRSSAQDPQAALGALGRA
LSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFRYVLEPSARRVWGNVTRWFITCVQQP
EFRAVLGEVVLHSGARPLSQQPGPEVPAPPKTATQLKKEAKKREKLEKFQQKQKTQQQQP
PPAEKKPKPEKKGKRDPGVITYDLPTPAGEKKDVSGTMPDSYSPQYVEAAWYPWWEQQGF
FKPEYGRSSVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMRGETTLWN
PGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKWKEEKGDRIYHQLKKLGSSL
DWNRACFTMDPKLSTAVTEAFVRLHEEGVIYRSTRLVNWSCSLNSAISDIEVDKKELTGR
TLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETMLGDVAIAVHPKDPRYQH
LKGKSVIHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHGLEAISIMDSR
GALINVPPPFLGLPRFEARKAVLEALKERGLFRGVEDNPMVVPLCNRSKDVVEPLLRPQW
YVRCGEMAQAASAAVTRGDLRILPEAHQRTWHAWMDNIRDWCISRQLWWGHRIPAYFVTV
SDPAVPPGQDPDGRYWVSGRSEAEAREKAAKEFGVSPDKISLQQDEDVLDTWFSSGLFPF
SIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDA
HGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLSSNLDPSEVEKAKEGQKADFPAGIPECG
TDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSPTSEPGG
HESLVDRWIRSRLTEAVRLSNQGFQAYDFPAVTTAQYSFWLYELCDVYLECLKPVLNGVD
QVVAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTLQAPPSLCVTPYPEPSECS
WKDPEAEAAMDLALSITRAVRSLRADYNLTRIRPDCFLEVADEATGALGSAVSGYVQTLA
SAGVVAVLALGAPVPQGCAVALASDRCSVHLQLQGLVDPARELGKLQAKRSEAQRQAQRL
RERRAAAGYPSKVPLDVQEADRAKLQQTEAELRKVDEAIALFQKML
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaggacagcccccgcccgcgcaggcggagcacggccgcccgcgccaggaccc
gcgggcccggaaacgctcgttgtcacaaagggggggaaacacgtgggcgcccacggcccg
gcggcggtcgcagggagctggggtcgcctcgagaaccgcccaccgtccccgcccggccga
gtcctcggctccggccgtcaggccggtccaccttcggccggcctccggccgcgaggtggc
tgtccggctcggcgtgaccacctcccgccagttttcttccacctcgttcggaccccctgc
gtaaccatgtccatcctgtatgtctcccctcaccccgacgccttccccagcctgcgtgcc
cttatagcggcgcgctatggggaggctggggaggggccgggctggggaggagcccacccc
cgaatctgtctccagccgcctccgaccagcaggactccctttcccccaccccgcctgccc
gccctggagcaggggcccggtgggctctgggtgtggggggccaccgctgtggcccagctg
ctgtggccggcagggctggggggccctggcggtagccgggccgccgttctggtccaacag
tgggtcagttatgccgacacggagctaataccagctgcctgtggagcaacgctgccggcc
ttgggactccggagctctgcccaggacccccaggctgccctgggggccctgggtcgggcc
ctgagccccttggaagagtggcttcggctgcacacctacctggccggggaggcccccaca
ctggctgacctggcggctgtcacagccttgctgctgcctttccgttacgtcctggagccc
tctgcacgccgggtctggggcaatgtgacgcgctggttcatcacgtgtgtccagcagcca
gaattccgggcggtgctgggagaggtggttctgcactcgggggccagacccctctctcaa
cagccaggccctgaggtccctgcacccccaaagacagctactcaactcaagaaagaggca
aagaaacgggagaagctagagaaattccaacagaagcagaagacccagcagcagcaacca
cccccagcagagaagaaaccaaaaccagagaagaaggggaaacgggatcctggggtcatt
acctatgacctcccaaccccagctggggaaaagaaagatgtcagtggcaccatgcccgac
tcctacagccctcagtatgtggaagctgcctggtacccttggtgggagcagcagggcttc
ttcaagccagagtatggacgttccagtgtgtccgccccaaatccccggggaatcttcatg
atgtgcatcccaccccccaatgtgacaggctccctgcacctgggccatgcactcaccaat
gccatccaggactccctgacccgatggcaccgcatgcgtggggagaccaccctgtggaac
cctggctgtgaccatgcgggcattgccacccaggtggtggtggagaagaagctctggcgc
gagcagggcctgagccggcaccagctgggccgagaggccttcctgcaggaggtctggaag
tggaaggaggagaaaggtgaccggatttaccaccaactgaagaagcttggcagctccttg
gactggaatcgagcctgtttcaccatggaccctaaactctccacagctgtgacagaggcc
tttgtccggctccacgaggaaggagtcatctaccgcagtacccgccttgtcaactggtcc
tgcagcctcaactctgccatctccgacatcgaggtggataagaaggagctgacaggtcgc
actctgctctccgtgcctggctacaaggagaaggtggaatttggggtccttgtctctttt
gcctacaaggtccaaggctcagacagtgacgaggaggtggtggtggcaacaactcggatc
gaaacaatgctgggagacgtggccatagctgtgcaccccaaagatcctagataccagcac
ctgaagggaaagagcgtgatccatccattcttgtctcggagcctccccattgtctttgac
gattttgtggacatggagtttggcacaggtgcggtgaagatcacccccgcacacgaccag
aacgactatgaggttgggcagcggcacggattggaggccatcagcatcatggactcccga
ggggccctcatcaacgtgcccccgcctttcctgggcctacccaggtttgaggccaggaag
gcagtgctggaggcactgaaggagcggggactgttccggggcgttgaggacaaccccatg
gtggtgccgctttgcaaccggtccaaggatgtggtggagcctctgctgcggccgcagtgg
tacgtgcgctgtggggagatggcccaggctgccagcgctgctgtgacacggggcgacctc
cgcatcctccctgaggcccatcagcggacgtggcatgcctggatggacaacatccgggac
tggtgcatctcccggcagctgtggtggggccaccgcatcccagcctacttcgtcacagtc
agtgaccccgccgtgcccccggggcaggacccagatgggcggtactgggtgagtgggcgc
agcgaggccgaggcccgggagaaggcagccaaggaatttggagtgtcccctgacaagatc
agtctccagcaagatgaggatgtactggacacctggttttcttctggcctcttccccttc
tccatcttcggctggcccaaccagtcagaagatctgagtgtgttctacccggggacgctg
ctggagacgggccatgacatcctcttcttctgggtggccaggatggtcatgcttggcctg
aagctcactggcaagctgcccttcagagaggtctacctccacgccatcgtgcgagatgcc
catggccgaaagatgagcaagtctctaggcaatgtcatcgaccccctggacgtcatccat
ggagtctccctgcagggcctccacgaccagttactgagcagcaacctggatcccagtgag
gtggagaaggctaaagaagggcagaaggcagacttcccggcggggattcccgagtgtggc
accgacgccctccggtttggactctgtgcctacacgtcccagggtcgtgacatcaacctg
gacgtgaaccggatattgggctaccgccacttctgcaacaagctctggaacgccaccaag
tttgccctccggggccttgggaagggttttgtgccctcaccaacctctgagcctggaggc
cacgagagcctggtggaccgctggatccgcagccggctgactgaggctgtgaggcttagc
aaccaaggcttccaggcctatgatttcccagctgtcaccactgcccagtacagcttctgg
ctctatgagctctgtgatgtctacctggagtgcctgaagcccgtgctgaatggggtggac
caagtggtggccgagtgtgctcgccagaccctctatacctgcctggacgttggcctgcgg
ctgctgtcacccttcatgcccttcgtgaccgaggagctgttccagaggctgccccggcgg
acactgcaagctccccctagcctctgtgttaccccctatccggagccctcagagtgttcc
tggaaggaccctgaggccgaagctgccatggacctggccctaagcataacgcgagctgtg
cgttccctgcgggcggactacaacctcacccggatccggcctgactgtttcctggaggtg
gccgatgaggccacaggtgctctggggtcggcggtgtcaggctacgtgcagacgctggcc
agtgcgggtgtggtggccgtcctggccctgggggcccctgtgccgcagggctgtgccgtg
gccctggcctctgaccgctgctccgtccacctgcagctgcaggggctggtggacccggcg
cgggagctgggcaagctgcaggccaagcgcagcgaggcacagcgccaggcccagcgtctg
cgggagcgccgcgccgccgcgggctaccctagcaaggtgccccttgacgtccaggaggca
gacagagccaagctccaacagacagaagcagagctcaggaaggtggatgaggccatcgcg
ctgttccagaagatgctgtga
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