Mirounga angustirostris (Northern elephant seal): 123838711
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Entry
123838711 CDS
T11530
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X5
KO
K17890
autophagy-related protein 16-1
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano04136
Autophagy - other
mano04140
Autophagy - animal
mano04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123838711 (ATG16L1)
04136 Autophagy - other
123838711 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
123838711 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mano04131
]
123838711 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
mano03029
]
123838711 (ATG16L1)
Membrane trafficking [BR:
mano04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
123838711 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
123838711 (ATG16L1)
Mitochondrial biogenesis [BR:
mano03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123838711 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
ATG16
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
eIF2A
NBCH_WD40
Beta-prop_HPS5
Beta-prop_DCAF12
Tricorn_2nd
Beta-prop_ACSF4
ZapB
CCDC93_CC
Beta-prop_NWD2_C
Beta-prop_VPS8
KASH_CCD
Beta-prop_WDR75_2nd
TolB_like
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
123838711
NCBI-ProteinID:
XP_045723664
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLTHKLQAEK
HDIPNRHEISPGHDGAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECQELRSKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHTEETSPVRAISRATSKRLSQPAGGLLDSITNIFGLSESPLLGHHSPDAAR
RRSVSSFPVPQDNVDPHPGSSKEVRVPTAATCVFDAHDGEVNAVQFSPGSRLLATGGMDR
RVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMS
GHFDKKIRFWDIRSESIVREMELLGRITALDLNPERTELLSCSRDDLLKIIDLRINAVRQ
TFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKVEKVLSKQHGSSINAVA
WSPSGSHVVSVDKGSKAVLWSEY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgccgacttcccccgttggaagcgccacatttcggaggag
ctgaggcggcgggaccggctgcagcggcaggcattcgaggagatcatcctgcagtataac
aagttgctagaaaagtcagatcttcattcagtgctgacccataagctacaagctgaaaag
catgacatccccaacaggcatgagataagtcccggacacgatggtgcctggaatgatagt
cagctacaagagatggcccagctgaggattaaacaccaagaagaactgaccgaactacac
aagaagcgtggggagttagctcaattggtgattgacctgaataaccaaatgcagcagaag
gacagggagatgcagatgaatgaagcaaaaattgcagaatgcttgcagactatctctgac
ctggagacggagtgccaagaactacgcagtaagcttcaggacctcgaaagagccaaccag
actctgaaggacgaatatgatgctctgcagatcacgtttactgccttggaggagaaactg
aggaaaactactgaagagaaccaggagctggtcaccaggtggatggccgagaaagcccag
gaagccaatcgcctaaatgcagagaatgaaaaagattcaaggaggcggcaagcccggctg
cagaaggagcttgcagaagcagcaaaggaacctctgcccgttgaacaggatgatgacatt
gaagtcattgtggacgaaacctctgatcacacggaggagacgtctcccgtgcgggccatc
agcagagcgaccagtaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttggtctgtccgagtctccccttctgggacatcactctcctgatgctgccagg
aggcgctctgtctcttcctttccagttccccaggataatgtggatcctcatcctggttct
agcaaagaagtgagagtgccaacagcagcgacgtgtgtcttcgatgctcacgatggggaa
gtcaacgctgtgcagttcagtccaggctcccggctgctggccacaggaggcatggatcgg
agagttaagctttgggaagtgtttggagataaatgtgagttcaagggctccctgtctggc
agtaatgcgggaattacgagcatcgaatttgacagcgctggatcttacctcctagcagct
tcaaatgattttgcaagtcgaatctggactgtggatgattatcggttacggcacacactc
acgggacacagcggcaaagtgctgtctgccaagttcctgctggacaatgcgcgtattgtt
tccggaagtcatgaccggaccctcaagctctgggatctacgcagcaaagtctgcataaag
accgtgtttgcaggatccagctgcaacgatatcgtttgcacggagcagtgtgtcatgagt
ggacatttcgataagaagattcgcttctgggatatccgatcggagagcatcgtcagggag
atggagctgctggggaggattactgccctggacttaaacccggagagaacagaactcctc
agctgctctcgcgatgacctgctaaagatcatcgatctgcgaatcaatgccgtcagacag
acgtttagcgcgcctgggttcaagtgcggctctgattggaccagagttgtgttcagccct
gatggtggttatgtggcagcgggctcggctgagggctctctctacatctggagcgtactt
tcggggaaggtggagaaggtcctttccaagcagcatggctcgtccatcaatgcagtggcg
tggtccccctccggctcccacgtcgtcagtgtggacaaaggaagcaaagctgtgctatgg
tcagagtattga
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integrated database retrieval system
