Mirounga angustirostris (Northern elephant seal): 123838779
Help
Entry
123838779 CDS
T11530
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano04151
PI3K-Akt signaling pathway
mano04382
Cornified envelope formation
mano04510
Focal adhesion
mano04512
ECM-receptor interaction
mano04518
Integrin signaling
mano04820
Cytoskeleton in muscle cells
mano04926
Relaxin signaling pathway
mano04933
AGE-RAGE signaling pathway in diabetic complications
mano04974
Protein digestion and absorption
mano05146
Amoebiasis
mano05165
Human papillomavirus infection
mano05200
Pathways in cancer
mano05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123838779 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123838779 (COL4A3)
04518 Integrin signaling
123838779 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123838779 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123838779 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
123838779 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
123838779 (COL4A3)
09158 Development and regeneration
04382 Cornified envelope formation
123838779 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123838779 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
123838779 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123838779 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
123838779 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
123838779 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mano04147
]
123838779 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
mano00536
]
123838779 (COL4A3)
Exosome [BR:
mano04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123838779 (COL4A3)
Glycosaminoglycan binding proteins [BR:
mano00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123838779 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123838779
NCBI-ProteinID:
XP_045723800
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MSPGTAPRPPALLLPLLLVLLAAAPTTGKGCVCKDKGPCFCDGIKGEKGEKGFPGPAGYP
GQKGFPGPEGLPGPQGPKGSPGLPGLTGPKGVRGITGLPGFSGPPGLPGIPGHPGPYGPA
GVPGCSGPKGEQGFPGLPGTPGYPGIPGAVGLKGEKGAPAAEGIELDGRGDPGLPGAPGF
QGLPGLPGFPGPVGPPGPPGFSGFPGTMGPPGPKGSMGDKVIGQKGERGVKGLTGPPGPP
GTVIVTLTGPDNRTDLKGEKGDKGALGKSGPPGPSGPPGESYGSQKGAPGEPGLQGKPGK
DGAPGFPGTEGAKGNRGFPGIRGKDGIKGWKGDIGPPGFRGPTEYYDSYQEKGDEGLPGP
PGPKGARGPQGPSGSPGVPGSAGSLRLGPRGAPGSPGVKGSKGERGPPGKNAVGPPGSPG
CPGSPGPVGLQGYPGPPGDIVFRKGPPGDGGLPGLVGFPGIPGADGPKGEPGLLCIQCPC
VPGPPGLPGLPGLDGIKGIPGGQGPSGITGSPGSPGSTGLPGFPGFPGALGDPGLKGEKG
EASQPEGEVGAPGDPGPRGHPGRRGLDGIPGTPGIKGSQGPKGEPALRGEKGDQGPPGYP
GTPGSPGPAGPPGPSNYGPQGEPGPKGTQGVPGAPGPPGEAGPKGEFSISTPVPGPPGPP
GPPGRAGPQGPPGVPGSTGKCGDPGLPGPDGEPGIPGIGFPGPPGPKGEQGFPGAKGASG
CPGEMGKPGSPGEPGLPGAKGEPGLAMPGEPGTPGFPGERGSSGENGEIGLPGPPGLPGI
PGTGGLDGPQGDPGKPGPPGEKGPPGRCTEGPRGAQGLPGLNGLEGQQGRRGETGPKGDP
GIPGLDRSGFPGEPGPPGMPGHRGEMGPPGQKGYPGNPGFFGLPGEKGMMGMMGYPGNTG
PPGPPGNPGTPGQRGSFGIPGAKGEKGPPGTKGEEGDKGPRGPSQISNLLGDKGEPGLKG
FAGRPGEKGNRGIPGFPGLKGLEGPPGPPGPPGLRGGPGSTGNPGEPGLHGGPGRMGNMG
VPGPKGHRGTSGLPGLTGRTGLPGVHGLRGDKGEPGYSADTRPGPPGPKGDPGLPGDMGR
KGERGLPGTPGHSGPTGTEGAPGNPGSPGHPGKPGPDGDLGLKGIKGFPGSPGVKGPPGP
PGLLGSPGPMGMRGSQGHDGIPGPAGEKGETGLLGAHPGPRGSPGAPGAKGDRGAPGLPG
LPGRKGAVGDAGPQGSTGVTGLPGPPGVPGTIIPGQKGNRGPPGLRGNPGETGPPGPPGS
RVRGIKGDKGLLGEPGPRGLPGTVGAEGPPGPPGAPGSPGLPGLRGDPGFHGFPGVKGEK
GNPGFLGPAGPPGQIGPKGPPGVRGDPGTVKIISLPGSPGPPGRAGGPGMQGEPGPPGPP
GILGPCGPRGKPGKDGIPGTPGPIGEKGNKGCKGEQGPPGSDGLPGLKGKPGHIGPRVTA
TMMRGFIFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTM
PFLFCNINDVCNFASRNDYSYWLSTPALMPMDMAPITGRALEPYISRCTVCEGPTNAIAI
HSQTTDIPSCPNGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
VCNYYSNSYSFWLASLNPQRMFRKPIPSTVKAGELEKIISRCRVCMKRRQ
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgggacggcgcccaggccgcccgcgctgctactgccgctcctcctggtgctc
ctggcggcggcgcccacgacaggcaagggttgtgtctgtaaagacaaaggcccgtgcttc
tgtgatgggatcaaaggggagaagggggagaaaggctttcctggacctgctggttatcca
ggccagaagggattccctggtcccgaaggcttgcctggaccacagggacccaagggctca
ccaggactcccaggactcactggtcccaaaggtgtgaggggaataactggattgccggga
ttttcaggtcctcctggacttccaggcatcccgggccatcctgggccttatggacctgct
ggtgtcccaggatgcagtgggcctaagggtgagcaagggtttccaggccttccggggaca
ccaggctacccggggatcccaggtgctgttggtttgaaaggagaaaagggtgctcctgct
gcagaaggtatagaacttgatggaagaggtgaccccgggctgccaggagctccgggattc
cagggtttaccaggccttccaggctttccaggacctgttggtccacctggccctccggga
ttctcaggctttccaggaaccatgggacctccaggacctaagggttccatgggcgataaa
gtgataggacaaaaaggagagcggggtgtgaaaggattaacaggaccccctggaccacca
ggaacggttattgtcacgctaacaggcccagataacagaacggatctcaagggggaaaag
ggagacaagggagccctggggaaatccggacctcctggaccctcaggaccgcctggagaa
tcttatggatctcaaaaaggtgctcctggagagcctggcctgcagggaaaacctggcaaa
gatggtgcccctggtttccccggcactgagggagccaaaggcaacaggggcttccctggg
atacggggtaaagacggcattaaggggtggaaaggggacattggccctccaggatttcgt
ggtccaacagaatattatgattcgtaccaggaaaagggagatgaaggacttccaggccca
ccagggcccaaaggagctcgtggcccacagggtcccagcggctcccctggggttcctgga
agtgctgggtcattgaggcttggccccagaggagcccctggatctccaggagtgaaagga
agtaaaggggaacgagggcccccaggaaagaatgcagtggggcctcctgggtccccaggt
tgtcctggttcaccaggccctgttgggttgcagggatatccaggaccaccaggtgacatc
gtttttcgcaaaggtccacctggagatggtggactcccaggccttgtagggtttccagga
atcccgggagccgatgggcccaaaggggaacctggcctcttgtgcatacaatgtccttgt
gtcccagggcccccaggtctcccaggactgccagggttggacggcataaaaggaatccca
ggaggacaagggccatctggcattacaggaagcccggggtccccaggaagtacgggtctt
ccaggatttccaggattcccaggtgctctgggggatccaggacttaaaggagaaaaaggt
gaagcgtctcagcctgagggagaagtgggtgccccaggggaccccgggcccagagggcat
cctggaagaaggggcttggatggaattcctggaactcccgggatcaaaggatcacaagga
cccaaaggtgaaccggccctgagaggtgagaagggggaccagggtcctccagggtatcct
ggcacccctgggtccccaggacctgcaggaccacctggaccatcaaactatggaccacag
ggagagcctggtccaaagggcacccaaggagttcctggagcccctggaccacctggagaa
gccggtcctaagggagaattcagtatttcgacaccagtcccagggcccccaggacctcca
gggccccctggccgtgctggcccccaaggtccacctggtgtccctggatccacaggaaaa
tgtggtgatccaggtcttcctgggcctgatggtgaaccaggaattccaggaatcggcttc
cctggaccccctggacctaagggagagcaaggttttccaggagcaaaaggagcatcgggt
tgtccaggagaaatggggaagcccgggtcacctggagaaccgggtctcccaggagccaag
ggagaaccaggactagccatgcctggagaaccaggaacaccaggttttccaggagaaaga
ggcagttctggggaaaatggagaaattggactccctggacctccaggtctccctgggatt
ccaggaactggagggcttgatggaccccaaggggatccagggaagcctggaccacctgga
gaaaaaggacccccaggaaggtgcacagagggccccaggggagcccaaggacttccagga
ttaaatggattggaagggcaacaaggcagaagaggtgaaacagggccaaagggagaccca
ggtattccaggcttggataggtcaggctttcctggagaacctggaccaccaggaatgcca
ggtcatcgaggtgaaatgggaccacctggtcaaaaaggatatccaggaaatccaggattt
tttggactaccaggtgaaaaaggaatgatggggatgatgggctatccgggaaacactggc
cctcctgggccccccgggaacccaggcaccccaggacagaggggtagctttggaattcca
ggagcaaagggtgagaaagggcccccaggaacgaagggggaagaaggagataaaggacct
cgggggccttctcaaatatccaatttactgggggacaaaggagaaccaggcctcaaagga
tttgctggaaggcctggtgagaaaggaaacagaggcattccagggttcccaggtttaaaa
ggactggaaggaccacctggaccaccaggtccaccaggcctcaggggaggtccaggcagc
actgggaatcctggagaaccaggactgcatggcgggccaggaagaatggggaacatgggg
gtgccaggtcctaaaggacacaggggaacttcgggactaccaggtttaactggaagaacg
ggtctcccaggtgttcacggtctccgaggagataagggagagccaggttattcggcagat
acaaggccgggaccaccaggaccaaagggagatccaggattgccaggtgacatgggaagg
aaaggagaaagagggctacctggcacccctggacattcggggcctactggaactgaggga
gcccctggaaatcccggaagtcccggccatccaggcaagccgggccctgatggtgatttg
gggttaaaaggcatcaaaggcttccctggttctccaggagtcaaaggccctccaggacct
ccaggattgctaggatctcctggaccaatgggtatgagaggcagccagggacatgatgga
attcctggtccagcgggagaaaaaggagaaacaggtttgctgggggcacatccaggcccg
agagggagccctggtgctccaggagccaaaggagacaggggcgccccgggcttacctggc
ctcccgggcaggaaaggggcagtgggagatgcggggccacagggatccactggcgtgaca
ggactcccagggccaccaggtgttcctggcacgatcatccctggccagaaaggaaatcga
ggcccaccaggcctcagaggaaatccaggtgagactggtcctccgggacctccagggagc
cgcgtaagaggcatcaaaggagacaagggactcctgggcgagcctggccccaggggtctg
cccggaactgtaggagccgaggggccaccgggtccgccgggagcaccaggaagcccaggt
ctgccagggctcagaggtgatcctggattccatggatttccaggtgtgaaaggggagaag
ggtaatccaggatttctaggaccagctggacctccagggcaaattgggccaaaaggacca
cccggtgtacgtggagaccctggcactgtcaagatcatctcccttccaggaagcccaggg
ccacctggccgtgctggaggaccaggaatgcaaggagaacctgggccaccagggccacca
ggaattctaggaccctgcgggccaagaggtaaaccaggcaaggatggaataccaggaact
cctgggccaattggagaaaaaggaaacaaaggttgtaaaggagagcaaggaccacctgga
tcagatggactgccaggcttgaaggggaaacctggacacattggaccacgtgtaactgca
acaatgatgagaggctttatcttcaccaggcatagtcagaccacagcgattccctcctgt
ccagaagggacagagccactctatagcgggttttctcttctttttgtacaaggaaatgaa
caagcccatggacaagacctgggaactctcggcagctgtctgcagcggtttaccacaatg
ccattcttgttctgtaacatcaatgatgtatgtaattttgcatctcgaaatgattattca
tactggctgtcaactccagctctgatgccgatggacatggctccaattactggcagggcc
ctggagccttatattagcagatgcactgtctgtgaaggtcctacgaatgccatagccatt
cacagccaaaccactgacattccctcatgtcccaatggctggatttctctctggaaagga
ttttcgtttatcatgttcacaagtgcgggttctgagggcgctgggcaagcactggcctcc
cctggctcctgcctggaagaattccgagccagtccatttatagaatgtcatggaagagga
gtgtgcaactactattcaaattcctacagtttctggttggcttcattaaacccccaaaga
atgttcagaaaacctattccatcaactgtgaaagctggggagttagaaaagataataagt
cgctgccgggtgtgcatgaagagaagacaatga
DBGET
integrated database retrieval system
