Mirounga angustirostris (Northern elephant seal): 123842007
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Entry
123842007 CDS
T11530
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
mano Mirounga angustirostris (Northern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mano03041
]
123842007
03009 Ribosome biogenesis [BR:
mano03009
]
123842007
Enzymes [BR:
mano01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123842007
Spliceosome [BR:
mano03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
123842007
Ribosome biogenesis [BR:
mano03009
]
Eukaryotic type
90S particles
Helicases
123842007
Pre-60S particles
123842007
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
123842007
NCBI-ProteinID:
XP_045727403
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MGIKEGTYCMEHWVLYANNESWNTTSETNDVGSRVVALQWRRFTDNMSHLPMKLLHKKIE
KWNLRLRQXNLKLQEDSDVSLSETQNGDVSEETVGGGKVKKSLKQSVNVGSSEAQNGEIA
KETVETIKLKKKKKKSTIIINGEAATQPPNSESKKKKKKKRKMVDDAGPDTKKVKTEDKG
DSEEGAQAPEETENSVEKPDDREEDSEMPSLPLGLTGAFEDTSFASLSNLVNENTLTAIK
EIGFTNMTEIQHKSIRPLLEGRDLLVATKTGSGKTLAFLIPAVELIVKLKFMPRNGTGVL
ILSPTRELAMQTFSVLKELMMHHVHTYGLIMGGSSRSAEAQKLGNGINIIXATPGHLLGH
MQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQLIKLLPRRRQTMLFSATQTQKVEDLA
RISLKKEPLYVGVDDDKANATVDDLEQGYVVCPSEKRFLLLFTFLNXKLMVFLSSCKSVK
YHQNNQNHYELLNYIDLPVLAIHGRQKQSKRTTTFFQFCNADSGILLCTDMAARGLDIPE
VDWVVQYDPPDNPKEYIHRVGRTARGLNGRGHALLILRPEELDFLHYLKQSKVPLSEFEF
SWSRISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFNVNNLNLPQLALSF
GFKVHPFVDLNMNSNDGKLKKRGGSSGFGYQEAKKVEKSKIFKHISKKSSDSQQFSH
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgggtattaaagagggcacgtactgcatggagcactgggtgttatatgcaaacaatgaa
tcatggaacactacatcagaaactaacgatgtgggtagccgagttgtggcactgcagtgg
agacgcttcaccgacaacatgtcccatctacccatgaaactcctgcacaagaaaatcgag
aaatggaacctcagattgcgccagtgaaacttaaagcttcaggaggactcggatgtgagt
ttatcggaaacccaaaatggagatgtgtctgaagaaacagtgggcggtgggaaggttaaa
aaatccctaaaacagtctgtgaatgtgggctcgtcagaagcccagaatggagagatagct
aaagaaacagtggaaactataaagttaaaaaaaaaaaagaagaaatctaccataataatc
aatggagaagcagcaacacagcctcccaattcagaatccaaaaaaaagaagaagaaaaag
agaaaaatggtggatgatgctgggcctgataccaaaaaagtgaaaactgaagacaaaggg
gactctgaagaaggggcccaagctcctgaagagacagaaaacagtgtggagaagccagat
gatcgggaagaggacagtgaaatgcccagcctacccctgggactgacaggagcttttgag
gatacttcatttgcttctcttagtaatcttgtcaatgagaacactctgacagcaataaaa
gaaataggttttacaaacatgactgaaattcagcataaaagtatcagaccacttctagaa
ggcagggatcttctagtggccacaaaaacaggcagtggcaaaacgctggcatttctcatc
cctgcagtcgaactcattgtcaagttaaagttcatgcctaggaatggaactggagttctt
atcctctcacctactagggaactggccatgcagactttcagtgttcttaaggagctgatg
atgcaccatgtccacacatacgggttgataatgggcggcagcagcagatctgctgaagca
cagaagctcggtaatgggatcaacatcagtgccaccccaggccacctcctgggccacatg
cagaataccccagggtttatgtataaaaatctgcagtgtctggttattgatgaggctgat
cgtatcttggatgttgggtttgaagaggaattaaaacagcttattaaacttctgccaaga
cgcaggcaaaccatgctcttttctgccacacaaactcaaaaagttgaagacttggcaagg
atttcgttgaaaaaggagccattgtatgttggtgttgatgacgataaagctaatgcaaca
gtggatgatcttgagcagggatatgttgtttgtccctcagaaaagagattcctcctgctc
tttacattccttaagaaactgatggtcttcctttcatcctgtaagtccgtgaaataccat
caaaacaaccaaaaccattatgagttgctgaactacatcgatttgcctgtcttggccatt
catggaaggcagaagcaaagtaagcgcacaaccacattcttccagttctgcaacgcagat
tcagggatattgttgtgtaccgacatggcagctagagggctggatattcctgaagtggac
tgggttgttcagtatgaccctccagataaccccaaggaatatattcatcgtgtgggaaga
acagccagaggcctaaacgggagagggcatgccttgctcattttacgccctgaagaattg
gatttccttcattacttgaagcaatccaaggttccattaagtgaatttgagttttcctgg
tccagaatttctgacattcagtctcagcttgaaaaattgattgaaaagaactacttcctt
cataagtcagcccaggaagcatataagtcctacattcgagcatatgattcccattctcta
aaacagatcttcaatgttaataacttaaatttgccgcagcttgctctgtcgtttggtttc
aaggtgcatccttttgttgatctgaacatgaacagcaatgacggcaagcttaaaaagaga
ggaggcagcagtggcttcggctaccaggaagccaagaaagtcgagaagtccaaaatcttc
aaacacattagcaagaagtcgtctgacagccagcagttctcccactga
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