Mirounga angustirostris (Northern elephant seal): 123842177
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Entry
123842177 CDS
T11530
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano03015
mRNA surveillance pathway
mano03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123842177
09123 Folding, sorting and degradation
03018 RNA degradation
123842177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mano03019
]
123842177
03041 Spliceosome [BR:
mano03041
]
123842177
Messenger RNA biogenesis [BR:
mano03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123842177
mRNA cycle factors
Stress granule specific factors
123842177
Spliceosome [BR:
mano03041
]
Complex C
Other components
Complex C specific factors
123842177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_7
RRM_3
RRM_10
RBD_RDR6
Motif
Other DBs
NCBI-GeneID:
123842177
NCBI-ProteinID:
XP_045727531
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MNAAASSYPMASLYVGDLPSDVTEAMLNGRFRPAGPVMSVRVCRDRISRRSLGYAHVNFQ
QPADPERAWGTMNFDAIKGKPIRIMWPQRDPSLRKSGVGNVFIKNLDESIDNKALYDTFS
AFGNILSCKVVRDENGSEGYAFVHFETQEAADKAIEKMNGMLLNGRKVFVGTFKSRKERE
AELGAKAKEFTNVYIENFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVILVGRAQKKVERQAELKRKFEHLKQERISRYPGVNLYIKN
LDDTIDGEKLRKEFSPFGSITSAKVMLADGRSKGSGFVCFSSPEEATKAVTELNGRIVGP
KPLHVTLAQRGEERKAHLTNQYMQRVAGRRALPANAILNQCWPAAGGYFVPAVPQAQGRP
PYYTPSQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGDAPASRGLPRT
AQRVGSECPGRLAMDFGGAGAAQQGLTDSCQSGGVPPAVQTLAPRAALAPHQYASSVAAL
TLPSSPCGPRSLQSMCRGRSP
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcggccagcagctaccccatggcctccctctacgtgggggacctgccctcg
gacgtcaccgaggccatgctgaatggaaggttccgtcctgcggggcctgtgatgtccgtc
cgggtctgccgcgataggatcagccgccgctccctgggttatgcccacgtcaacttccag
cagccggctgaccctgagcgggcctggggtaccatgaactttgatgcgattaagggaaag
ccaatccgtatcatgtggcctcagagggatccctctttgagaaaatctggtgtgggaaac
gtcttcatcaagaatctggacgaatctatagataacaaggcactttatgataccttttct
gcttttggaaacattctgtcttgcaaggtggtgcgtgatgagaacggctctgagggttat
gcctttgtccacttcgagacgcaagaggctgctgacaaggccatcgagaagatgaacggc
atgctcctcaatggccgcaaagtgttcgtgggcacattcaagtctcgaaaagagcgggaa
gctgagcttggagccaaagccaaggagttcaccaatgtttatatcgaaaactttggggaa
gaggtggatgatgagagtctgaaagagctatttagccagtttggtaagaccctaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaaa
cacgaggatgccaataaggctgtggaagagatgaatggaaaagaaatcagtgggaaagtg
attttggtaggccgtgcccagaagaaagtggaacggcaggctgagttaaagcggaaattt
gaacacctaaaacaagagagaatcagtcggtatccgggggtgaatctctacattaagaac
ttggatgacaccattgatggtgagaagttaaggaaagagttttctccttttggatcaatc
accagtgctaaggtaatgttggcagatgggagaagcaaagggtctggctttgtctgcttc
tcatctcctgaagaggcgaccaaagcagtcaccgagctgaacggacgcatcgtgggcccc
aagcccctacatgtcaccctggcccagaggggggaagagcgaaaggctcacctgaccaac
cagtacatgcagcgggtggctggaaggcgagcactccctgccaatgccatcttaaatcag
tgctggcctgcggccggtggttacttcgtgccagcagtcccccaggcccagggaagacct
ccatattacacacccagccagttagcacagatgaggcctaacccccgctggcagcagggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtccc
gctcttcgccatctggctccaactggtgatgctccggcctctcgcggcctccctaggact
gctcagagagtcgggtctgagtgcccgggccgcttggctatggactttgggggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggtgttcccccagccgtgcag
accttagcacctcgtgctgctctcgcacctcaccaatacgcctccagtgtcgcagccctc
accctgccatccagcccctgcgggccccgcagcctgcagtccatgtgcaggggcaggagc
ccctga
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integrated database retrieval system
