Mirounga angustirostris (Northern elephant seal): 123843762
Help
Entry
123843762 CDS
T11530
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano03082
ATP-dependent chromatin remodeling
mano04714
Thermogenesis
mano05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123843762 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123843762 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123843762 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mano03021
]
123843762 (SMARCD1)
03036 Chromosome and associated proteins [BR:
mano03036
]
123843762 (SMARCD1)
Transcription machinery [BR:
mano03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123843762 (SMARCD1)
Chromosome and associated proteins [BR:
mano03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123843762 (SMARCD1)
PBAF complex
123843762 (SMARCD1)
GBAF(ncBAF) complex
123843762 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
123843762
NCBI-ProteinID:
XP_045729430
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHIISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggtgccggagcctcagga
ggggcgggcgcggcggctgccctgggtccgggcgggactccggggcctcccgtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcacctcagcagatacagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaaatcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagct
ttgtccaaatatgatgccaccaaacaaaagaggaaattctcttccttttttaagtccttg
gtgatcgaactggacaaagacctgtatgggccagacaaccatctggtagaatggcacagg
accgccactacccaggagacggacggcttccaggtgaagcggccaggagacgtgaatgta
cggtgtactgtcctcctgatgctggactaccagcctccccagtttaaattagaccctcgc
ctggctcggctcctgggcatccacacccagacccgtccagtgatcatccaagcactgtgg
caatatattaagacacataagctccaggaccctcacgagcgggagtttgtcatctgtgac
aagtacctccagcagatcttcgagtctcaacgtatgaagttttcagagatccctcagcgg
cttcacgccttgctcatgccaccggagcccatcatcattaatcacatcatcagtgttgac
ccaaatgatcagaaaaagactgcttgttatgacatcgatgtggaagtggatgatactttg
aaaacccagatgaattctttcctgctgtcgactgccagccagcaggagattgctactcta
gacaacaagatccatgagacaatagaaactatcaatcagctgaagacccagcgggagttc
atgctgagcttcgccagagaccctcagggtttcatcaatgattggctacagtcccagtgc
cgggacctcaagaccatgaccgatgtggtgggtaacccagaggaagagcgccgagccgag
ttttacttccagccttgggctcaggaggctgtgtgccgatacttctactccaaggtgcag
cagagacgacaagaattagagcaagccttgggaatccgaaatacatag
DBGET
integrated database retrieval system
