Mirounga angustirostris (Northern elephant seal): 123843841
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Entry
123843841 CDS
T11530
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X2
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mano Mirounga angustirostris (Northern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mano04121
]
123843841 (PDZRN4)
Enzymes [BR:
mano01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123843841 (PDZRN4)
Ubiquitin system [BR:
mano04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
123843841 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
123843841
NCBI-ProteinID:
XP_045729578
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRTPLSK
PAYGTAPAMQLMHASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHSLHPMEHEF
FEDNEYLSSLPADADRAEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPN
SIAAKDGRIREGDRILQINGEDVQNREEAVALLSSDECKRIVLLVARPEIQLDEGWLEDE
RNEFLEELNLEMLEEQHNEAMQCTANEAEQPKKQEEEEGTTDTATSSSNNHEKDSGVGRT
DESLRNDESSEQENAAEDPNSTSLKSTRELGQSQDTLGSVELQCNESFMSGEYIDSDCIG
NPDEECERFRQLLELKCKFRNPGEYDLYYSSSTIECHQGEQEGVEHELQLLNEELRNIEL
ECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSMDMPRGKLDDIIEHPEKSDKDSSSA
YNTAESCRSTPLTVDRSPDSSLPRVINLTNKKNLRSTMAANQSSSGQSSKESTSTKAKTM
EQDCSVEGKEKISESNKLSDQEKTSSEHIPYLSPYHSSSYRYANIPAHARHYQSYMQLIQ
QKSAVEYAQSQLSLVSMCKEAQKCSEPKMEWKVKIRSDGTRYITKRPVRDRILRERALKI
KEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSG
SEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatttgtgcacttttcagaaaagagaggaacactacaaactgctgtatgaa
gtttcccaggtcaatgggaaggatctctcaaaggccacccatgaagaggccgtggaagct
tttcgaaatgccaaggagcccattgtggtccaggtgctaagacgaacaccgctcagtaaa
ccagcctatggaacggccccagcaatgcagctcatgcacgccagcactcagactgacatc
accttcgagcacatcatggctctggccaaacttcggccaccgacccctccagtgccagac
atctgtccattcctgctctcagacagctgccattctcttcatccgatggagcatgaattt
tttgaggacaatgagtatctttccagcttgcctgctgatgcagacagagcagaggacttt
gaatatgaggaggtcgagctgtgtcgtgttagtagtcaagagaagctgggcctgacagtc
tgttacagaacggatgatgaagaagacacaggcatttatgtcagcgaggtagatccaaac
agcattgctgccaaagatggccgaattcgagaaggggatcggattttgcaaataaatggg
gaagatgtccagaatcgagaagaagcagtggcgttgctgtctagtgatgagtgcaagaga
atcgtgctgcttgtcgcaaggcccgagattcagctggatgaaggctggttggaagatgaa
aggaatgaattcttagaggagttaaacttggagatgctggaagaacagcataatgaagcg
atgcagtgcacggccaatgaggcggagcagccaaaaaaacaagaagaagaagaaggcaca
acagacacagcaacatcgtcctccaacaaccatgagaaggacagtggggtggggcgcaca
gatgaaagcttgcggaatgatgagagctcagagcaggagaatgcagctgaggatcccaac
agcacatctttgaagagcacgagagagctggggcagagccaagacactctaggaagcgtt
gaacttcagtgcaatgagagcttcatgtctggcgaatacatcgactccgactgcattggc
aacccagatgaggagtgtgaaagattccgacagctcttggagctcaaatgcaagtttcga
aaccctggagagtatgacctgtattactcgagcagcacaatagaatgccatcagggggaa
caagagggtgtggagcacgagctacagttgcttaatgaagaactaagaaacattgaactg
gagtgccaaaatatcatgcaggctcacaggctccagaaggtgacagaccagtatggagac
atctgggctttgcacgatggaggattccggaattataacaccagcatggatatgccacgg
ggaaaactagatgacatcatcgaacacccagagaagtcagacaaggacagttctagtgct
tacaacacagcagaaagctgcagaagcaccccactcactgtggaccgttcccctgacagc
tcccttccaagagtgatcaacctcaccaataagaaaaacctgagaagcacaatggccgcc
aatcagtcttcttccggacagagcagtaaagagtcgacctccaccaaagccaaaaccatg
gaacaggactgcagcgtggagggcaaggagaagatttcagaaagcaacaagctttctgat
caggagaaaaccagcagtgaacacatcccttacctctctccttaccacagctcctcatat
agatatgcaaacatcccagcgcatgcccgccattatcaaagctacatgcagttaattcaa
cagaaatctgcagttgagtatgctcagagccagctgagtttagtgagcatgtgcaaggag
gctcagaagtgttcagagcccaagatggaatggaaggtgaaaatcaggagcgacgggaca
cggtacataacaaagagaccagtgcgagaccggattctgagggaacgtgccttaaagatc
aaggaggagcgcagtggcatgacgacagatgatgacaccatgagcgagatgaaaatgggc
cgctactggagcaaagaggagagaaagcagcacctggttcgggccaaagagcagcgtagg
cgccgagagtttatgatgcggagccgcttggagtgtcttaaggagagcccccagagtggc
agcgagggcaagaaggagatcaacatcattgaactgagtcacaaaaagatgatgaaaaaa
agaaacaagaaaattttggacaactggatgacaatccaagaactgatgacccacggggcc
aaatctcctgatggcacacgagttcataatgccttcttgtcagtcaccactgtatga
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integrated database retrieval system
