KEGG   Mirounga angustirostris (Northern elephant seal): 123845549
Entry
123845549         CDS       T11530                                 
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain isoform X1
  KO
K07603  collagen type XVII alpha
Organism
mano  Mirounga angustirostris (Northern elephant seal)
Pathway
mano04382  Cornified envelope formation
mano04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:mano00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    123845549 (COL17A1)
  09158 Development and regeneration
   04382 Cornified envelope formation
    123845549 (COL17A1)
SSDB
Motif
Pfam: Collagen DUF2868
Other DBs
NCBI-GeneID: 123845549
NCBI-ProteinID: XP_064451313
LinkDB
Position
Unknown
AA seq 1490 aa
MDVTKKNKRDGTEVTERIITETVTTRLTSLPPKGGTSNGYAKTGSLGGGSRLEKHSLTHG
SSGYINSSGSTRGNASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHGTYEGSSSGNSSP
EYPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNS
SNTLPIPKKGTVETKMVTASSQSVSGTYDTTILDANLPSHMWSSTLPAGSSMGTYHNNVT
TQSSSLLNTNAYSAGSVFGVPNNMAPCSPTLHPGVSTCSSVFGMQNNLAPSSSALSHGTA
TASTAYGVKKNLPQSPAVVSTGTSTSAACTTNVQSDDLLHKDCKFLILEKDNTPAKKEME
LLIMTKDSGKVFTASPASITATSFSDDTLKKEKQAAYAADTCLISEANGDVKTVSTKGKA
ASAEIHNYSHRGGGGGGGGGGGGGGPWGAAPAWCPCGSCCSWWKWLLGLLLTWLLLLGLL
FGLIALAEEVRALKARVAALEQSPDAVLLYKEKAERASKDRLHGAVPGVGAGAGRLGLDG
HSQEVLWLFVRDKLMAEQESGNLRGSPGPKGDMGSQGPKGDRGLPGTPGIPGLLGHPGPE
GPKGQKGSVGDPGLEGPMGQRGREGPMGPRGEPGPPGFGEKGDRGVAGEPGVQGPPGVPG
SVGPKGSNGSPGPRGLPGPIGPQGLRGDVGLPGIKGDKGPLGSPGPKGDQGEKGPRGLTG
EPGLRGLPGAVGEPGAKGAVGPAGPDGHQGPRGEQGLMGMPGTRGPQGPSGDPGKPGLTG
PQGPQGLPGTPGRPGAKGEPGASGRIMTTEGSSTITVPGPPGPPGAMGPPGPPGAPGPVG
PAGLPGQQGPRGERGLAGESFMGSHSSISEVLSAQGLDLRGPPGPPGPPGPPGPSIPGPP
GPRGPAGEGLPGPPGPPGSFLTNSETFFSGPPGPPGPPGPKGDQGPPGPRGHQGEQGLPG
FSASGGFNLQGPPGPRGPKGDKGDPGVPGAHGIPGGLSQGGSSSSTMFMPGPPGPPGPPG
PPGSISSSGREIQQYISEYMQSDSIRSYLSGVQGPPGPPGPPGPVTTIAGETFDYSELAS
RVGSYLQTSGYSISSSTSISAEDIVAVLKRDDVRQYLRQHLIGDWTLQSLDYAELSSRIL
SYMSSSGISIGLPGPPGPPGLPGTSYEELLSLLQGSEYRGIVGPPGPPGPPGIPGNVWSS
ISLEDLSSYLHTAGVSSIPGPPGPPGPPGPRGPPGVSGALATYAAENSDSFRSELISYLT
SPDVRSFIVGPPGPPGPQGPPGDSRLMSMDGSYSRGSRSSHSESASRSSSYSSSMGIGGS
SGGSLGEGGAFGLDMGLGRGYGGAVEGGMHGGEGGPFGAGFAGGLDYNELAVRVSESLQR
QGLLQGMAYTVQGPPGRPGPQGPPGISKVFSAYSNVTEDLMDFFRTYGAIPGPPGQKGEV
GAPGPKGERGPAGPPGRPGPPGPQGHKGEKGDTGDQVYAGRRKRSIAVKP
NT seq 4473 nt   +upstreamnt  +downstreamnt
atggatgtaaccaagaaaaacaagcgagatggcaccgaagtcactgaaagaattatcacg
gaaacagtaactacaagacttacatccttgccgccaaaagggggaaccagcaacggctat
gctaaaacgggctctctaggtggagggagccggctggagaagcacagcctgacccatggc
agcagtggttacataaactcaagtgggagcacgcggggcaatgcctccacatccagttac
aggagggctcactccccggcctccactctgcccaactcaccaggctccacctttgaaagg
aaaactcacgtcacccgccacggaacatacgaagggagctccagtggcaactcttctccg
gagtaccctcggaaggaattcgcatcttcttcaaccagaggaaggagccaaacacgagag
agtgaaatccgagtccgactgcagagcgcatccccatctacccgatggacagaattggat
gatgttaagcgtttgctcaaggggagccgatcagcaagcgtgagccctacccggaactcc
tccaacaccctccccatccccaagaaaggcacggtggagaccaagatggtgacggcgagc
tcccagtcagtgtccggcacttatgataccaccatcctggacgccaaccttccatcccac
atgtggtcttccaccttgccagcggggtcctccatggggacctatcacaacaacgtgaca
acccagagctcgtccctcctcaacaccaacgcctattctgcaggatcagtctttggagtt
ccaaataacatggcaccctgctctcccacgctgcacccgggggtcagcacctgctcctca
gtgtttggcatgcagaacaacctggcacccagctcatccgccctgtcccacggcacggcc
accgcctccacagcgtatggtgtgaagaagaacctgccgcagagccccgctgtcgtgagc
actggcacgtccacctctgccgcctgcaccacaaatgtccagagtgatgatctcctgcac
aaggactgtaaattcctgatcctggagaaagacaacacaccggccaagaaggagatggag
ctgctgatcatgaccaaggacagcgggaaggtcttcactgcctccccggccagcatcact
gcaacatctttttcagatgacaccctcaagaaagaaaaacaagctgcctacgctgcggac
acctgcctgatttcagaagctaatggagacgtgaagaccgtgtccaccaagggcaaggcc
gcctccgcagaaatccacaactacagccaccgcggtgggggcggcggcgggggaggcgga
ggcggcggcggcggcccgtggggggcggcgccggcctggtgcccctgcggctcctgctgc
agctggtggaagtggctgctgggcctgctgctcacctggctactgctgctggggctactc
ttcggcctcattgctctggcggaggaggtgagggcgctgaaggcgcgggtggccgcgctg
gagcagagcccggacgccgtgctgctttacaaggagaaggcggagcgcgccagcaaggac
aggctgcatggcgccgtgccgggcgtgggagcaggcgcggggagactggggctcgacggc
cacagtcaggaggtgctctggctgttcgtgagggacaagctgatggctgaacaggaaagc
ggaaatctccgaggaagccccggcccgaaaggtgacatgggaagtcaaggccctaaaggc
gaccgagggctccctgggactccaggcatccctgggctcttgggccacccgggtccagaa
ggaccaaagggacaaaaaggcagtgtgggagatccgggcctggagggacccatgggccag
agaggaagagaaggccccatgggacctcgtggtgagccagggcctcctgggtttggagag
aaaggggacagaggggttgctggtgaacccggtgttcagggcccacccggcgtcccaggt
tctgtgggtcccaaaggttccaatggctcccctggcccacggggtctcccaggccctata
ggtccccaggggctccgaggggacgttggactccctggtatcaaaggtgacaaaggacct
ctggggtcaccaggacccaaaggtgaccagggagagaaaggaccccgaggcctcacaggt
gagccaggcttgagaggcttgcctggtgctgtgggtgagcccggagctaaaggagcagta
ggacccgctggccccgatggacaccaaggcccaagaggtgaacaagggctaatggggatg
cctggaacccgcggcccacaggggccttctggagaccccggaaagccaggtctcacagga
ccccaaggacctcagggacttcctggtacccccggccgaccaggagctaaaggtgaacct
ggagcttcaggccggatcatgaccacagagggatcatcgacgatcactgtcccaggcccc
ccggggcctcctggagccatgggaccaccgggacctccaggtgccccaggtcctgtgggc
ccagctggtctgcctggacagcaaggcccacgcggggagcgaggacttgctggcgagtcg
ttcatgggtagccacagctccatctccgaggtcctctctgcccaaggtcttgatttacga
ggtcccccaggcccacctggaccaccagggcctccaggaccttccattccaggcccgcca
ggaccccgaggcccagcaggagaaggcctgccaggcccaccaggcccaccgggatctttc
ctgaccaactcagagaccttcttctctggccccccaggcccccctggccccccaggcccc
aagggagaccaaggccccccaggcccccgaggacaccaaggcgagcaaggcctcccaggg
ttctcagcctcgggtggattcaacctgcagggaccacctggcccccggggacccaagggg
gacaaaggtgatcctggggtcccaggggctcatggcattcctggtggtctctctcaaggg
ggatcgtcgtcgagcaccatgttcatgccaggccccccgggtcccccgggccccccaggg
cctccgggctccatcagcagctctggccgggagatccagcagtacatctctgagtacatg
cagagcgacagcattcggtcctatctctctggagttcagggtccccctggaccacctggt
cccccagggcctgtcaccaccatcgcaggggagactttcgactactcagagctggcaagc
cgcgtcgggagctacttacagacctcggggtacagcatcagctcctccacctccatctct
gctgaggacatcgtggctgtgctgaagcgggacgacgtgagacagtatctgcgtcagcat
ctcattggagattggaccctccagtctttggactacgccgagctgagcagccgcattctc
agctacatgtccagctctggaatcagcattgggcttcctggccccccaggaccccccggc
ttgccaggaacatcctatgaagagctactctccttgcttcaggggtctgaatacagaggc
atcgttgggcccccaggtccccctgggcccccagggatcccaggcaacgtgtggtccagc
atcagcttggaggacctctcttcttacctgcacactgccggtgtgtcctccatccccggc
cctccaggccctcctggtcctccaggccctcgagggcctcccggggtctcgggagctctg
gcaacatatgcagccgaaaacagcgacagcttccggagtgaactgattagctacctcaca
agcccggatgtgcggagcttcatcgtgggccccccaggccctccagggccgcaggggcca
cccggggacagccgcctcatgtccatggacggctcctacagccggggcagcaggtcctct
cacagcgagtcggccagtcggagctcctcctacagctcttccatgggcatcggagggtcc
agtggaggctccctcggtgaaggcggggcctttggcctggacatgggcctgggccgaggc
tacgggggagcggtagaaggcggtatgcacggtggtgaaggtggaccgttcggggctggc
ttcgccggaggtctggactacaatgagctggctgttcgggtatctgagagcttgcagcgt
cagggcctgctgcaagggatggcctacacagtccagggccccccgggccggccagggccc
cagggcccccccggcatcagcaaggtcttctctgcctacagcaacgtgactgaggacctc
atggactttttccgaacttatggagccattccaggcccccctgggcagaaaggagaggtg
ggcgccccaggacccaaaggtgaaaggggccccgcaggaccaccaggtcggcctgggcca
cccggccctcaagggcacaaaggagaaaaaggagacacaggtgaccaagtctacgcgggg
cggagaaagagaagcatcgccgtcaagccatga

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