KEGG   Mirounga angustirostris (Northern elephant seal): 123846723
Entry
123846723         CDS       T11530                                 
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
  KO
K07573  exosome complex component CSL4
Organism
mano  Mirounga angustirostris (Northern elephant seal)
Pathway
mano03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mano00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123846723 (EXOSC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mano03019]
    123846723 (EXOSC1)
Messenger RNA biogenesis [BR:mano03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     123846723 (EXOSC1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     123846723 (EXOSC1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4
Other DBs
NCBI-GeneID: 123846723
NCBI-ProteinID: XP_045734499
LinkDB
Position
Unknown
AA seq 207 aa
MRSRLRFPPVAVMAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKSSENG
ALPVISVMRETESQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDV
RATEKDKVEIYKSFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPIS
WCEMQCPKTHTKEFRKVARVQPEFLQT
NT seq 624 nt   +upstreamnt  +downstreamnt
atgagaagtcgacttcgtttccctccagtggcagtcatggcgccacccgtgaggtactgc
attccgggcgaacgtctgtgtaacttggaggagggcagcccgggcagcggcacttacacc
cgacacggctacatcttttcgtcgcttgctggctgcctgacgaagagcagcgagaacggc
gcgcttcctgtcatttctgtcatgagagaaacagagtcccaattactaccagatgtgggg
gctattgtaacctgtaaggtctctagcatcaattcacgctttgccaaagtgcacatccta
tatgtagggtccacaccacttaagaactcttttcgaggaactatccgcaaggaagatgtc
cgagctactgaaaaagacaaggttgagatttataaaagtttccgcccaggtgacattgtc
ttggccaaagtgatctccctgggtgatgcacagtccaactacctcctgaccactgctgag
aacgaactcggggtggtggtcgcccacagtgaatcaggtgtccagatggttcccattagc
tggtgtgagatgcagtgccctaagacccacactaaagaattccggaaagtggcccgagta
caacctgaattcttgcagacttaa

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