Mirounga angustirostris (Northern elephant seal): 123846824
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Entry
123846824 CDS
T11530
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123846824 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mano03021
]
123846824 (TAF5)
03036 Chromosome and associated proteins [BR:
mano03036
]
123846824 (TAF5)
Transcription machinery [BR:
mano03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123846824 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
123846824 (TAF5)
Chromosome and associated proteins [BR:
mano03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123846824 (TAF5)
STAGA complex
123846824 (TAF5)
TFTC complex
123846824 (TAF5)
SAGA complex
123846824 (TAF5)
SLIK complex
123846824 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
Beta-prop_ACSF4
VPS8_N
LisH_PAC1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
123846824
NCBI-ProteinID:
XP_045734703
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGGGTTNNGPNGGGGNVATASSSAGG
DGGTPKPSAAVSAVAPAGAAPVPAAAPEAGVPHDRQTLLAVLQFLRQSNLREAEEALRRE
ARLLEEAVAGTGAPGEADGAGTEAASALLSRVTASAPGPAAPDPPGTGASGAAAVSGLAT
GPAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQL
FYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLD
FRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSL
AGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDP
NAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVT
DDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKIL
YGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYY
FVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNG
NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRF
SRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTP
VVHLHFTRRNLVLAAGAYSPQ
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagccagagggaccg
ccgacgctgctacctccgcaggcgggggacggcgctggcgagggtggcggcggcactacc
aacaacggccccaacggcggcggcgggaacgttgcgacggcgtcgtcgtcggccggcggg
gatggtgggacccccaagccctcggcggctgtctccgccgttgctccggcgggggcggcc
ccggtgcccgccgctgctccggaggccggcgttccccacgaccgacagactctgctggcc
gtgctgcagttcctgcggcagagcaacctccgcgaggccgaagaggcgctgcgccgtgag
gcccggctgctggaggaggcagtggcgggcaccggagccccgggagaggcggacggcgcc
ggtacagaggcggctagcgcgcttctcagccgggtcacagcctcggcccccggccccgcg
gcccctgaccctccgggcaccggcgcttcgggggccgccgccgtctcgggcttagcgaca
ggtcctgcggctccggggaaagttggaagtgtagctgtagaagaccagccggatgtcagt
gctgtgctgtcagcctacaaccaacaaggggaccccacaatgtatgaagaatactatagt
ggactgaaacacttcattgaatgttccttggactgccatcgggcagagttatcccaactg
ttttatcctctgtttgtacacatgtacttggaactagtctacaatcaacatgagaatgaa
gcaaaatcattttttgagaagttccatggagatcaggaatgttattaccaggatgaccta
cgagtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggat
tttcgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagagg
catcttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacatt
gacatctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttg
gcaggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagag
ccagaaattgaggtgcctttggatgatgaagatgaagaaggagaaaatgaagaaggaaaa
cctaaaaagaagaagcctaaaaaagatagcattggatccaaaagcaaaaaacaagatccc
aatgctccacctcaaaacagaatccctcttccagagttgaaagattcagataagttggat
aagataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagactgtttaccc
tccatttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcact
gatgattctagtttgattgctggaggttttgcagattcaactgttagagtgtggtctgtg
acacccaaaaagcttcgtagtgttaaacaagcagcagatcttagcctcatagacaaagaa
tcagatgatgtcttagaaagaataatggatgagaaaaccgcaagtgagttgaagattttg
tatggtcacagcgggcctgtctatggagccagcttcagtccggataggaactacttgctt
tcctcttcagaggatggaactgttagattgtggagtcttcaaacatttacttgcttggtg
ggatataaaggacacaactacccagtatgggatacacagttttctccatatggatattat
tttgtgtcagggggccacgatcgagtagctcggctctgggctacagaccactatcagcct
ttaaggatatttgctggccatcttgctgatgtgaattgtaccagattccatccaaattct
aattatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcctgaatggg
aactgtgtaagaatattcactggacacaagggaccaattcattccttgacattttctccc
aatgggagattcctggctacaggagcaacggatggcagagtactcctttgggatattgga
catggtttgatggttggagaattaaaaggccacactgatacagtctgttcacttaggttt
agtagagatggtgaaattttggcatcaggttcaatggataatacagtccggttgtgggat
gctgtcaaagcatttgaagatttagagactgatgattttactacagccaccgggcatata
aatttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacgcca
gttgtacacctccattttacgcgaagaaacttggttctagctgcaggagcttatagtccg
caataa
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integrated database retrieval system
