Mirounga angustirostris (Northern elephant seal): 123848205
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Entry
123848205 CDS
T11530
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123848205 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mano03021
]
123848205 (SMARCA5)
03036 Chromosome and associated proteins [BR:
mano03036
]
123848205 (SMARCA5)
Transcription machinery [BR:
mano03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
123848205 (SMARCA5)
Chromosome and associated proteins [BR:
mano03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
123848205 (SMARCA5)
RSF complex
123848205 (SMARCA5)
WICH complex
123848205 (SMARCA5)
B-WICH complex
123848205 (SMARCA5)
NORC complex
123848205 (SMARCA5)
BRF complex
123848205 (SMARCA5)
NuRF complex (fruit fly)
123848205 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
123848205
NCBI-ProteinID:
XP_064441173
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MSSAAEPPPPPPPESAPSKPAASAAGSVSNSSNKGGPEGVAAQAASSAASSGPADSEMEE
VFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKM
KPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKL
RDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKST
LHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKF
NWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFN
SADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQ
REWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVT
NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQE
SINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTK
TVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATH
VFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYR
EKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPR
LFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQ
GFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKI
MAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLH
KLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK
AEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgagcctccgccacccccgcctcccgagagcgcgccttccaagccc
gcagcctcggccgccggcagcgtgagcaacagcagcaacaaaggcggcccggagggcgtc
gcggcccaggcggcttcctctgcggctagctccggccccgcggactccgagatggaggaa
gtatttgatgatgcatctcctggaaagcaaaaagaaattcaagaaccagatcctacctat
gaagaaaaaatgcaaactgaccgagcaaatagatttgaatatttattaaagcagacagag
ctgtttgcacatttcatccagcctgctgctcagaagactccaacctcacctttgaagatg
aaaccagggcgaccacgaataaaaaaggatgagaaacaaaacttgctatcagttggcgac
taccgacatcgtagaacagagcaagaggaagatgaagaactattaacagaaagctctaaa
gcaaccaatgtttgcactcgatttgaagattctccatcatatgtaaagtggggtaaactg
agagattatcaggtgcgaggattaaattggctcatttctttgtatgagaatggcatcaat
ggtatccttgcagatgaaatgggcctgggaaagactcttcaaacaatttctcttcttggg
tacatgaaacactatagaaacattcctggtcctcatatggttttggttcctaagtctaca
ttacacaactggatgagtgaattcaagagatgggtaccaacacttagatccgtttgtttg
ataggagataaagaacaaagagctgcttttgtcagagatgttttattaccaggagaatgg
gatgtatgtgtaacatcttatgaaatgcttataaaagagaagtctgttttcaaaaagttt
aattggaggtacttagttatagatgaagctcacaggatcaaaaatgaaaaatccaagttg
tcagaaatagtgagggaattcaagaccacaaatcgactattgctgactggaacacctctt
caaaacaacttgcatgagctctggtcacttcttaattttttgttgccagatgtctttaat
tcagcagacgactttgattcatggtttgatacaaacaattgccttggggatcaaaagcta
gttgagaggcttcatatggttttgcgtccattcctccttcgtcgaattaaagctgatgtt
gaaaagagtttgcctccgaagaaggaagttaaaatctatgtgggtctcagcaaaatgcaa
agggaatggtatactcggatattaatgaaggatatagatatattaaactctgcagggaag
atggacaaaatgagattattgaacatcctgatgcagttgaggaaatgctgtaatcatccg
tatctatttgatggagctgaacctggtccaccttatacaacagatatgcatctagttacc
aacagtggcaaaatggtggtgttagacaagctgctccctaaattaaaagaacaaggttca
cgagtactaatcttcagtcagatgacaagggtattggatattttggaagattattgcatg
tggagaaattatgagtactgtagattggatgggcagacaccccatgatgagagacaagag
tccatcaatgcatacaatgagccaaacagcacaaagtttgttttcatgttaagcacacgt
gctggtggtcttggcattaatcttgctactgctgatgtagtaattttgtatgattcagat
tggaatccccaagtagatctccaggctatggaccgagcacatagaattggacaaaccaag
accgttagagtgttccgctttataactgataacactgtggaagaaagaatagtggaacgt
gctgagatgaaactcagactggattcaatagtcattcaacaaggaaggcttgtggatcag
aatctgaacaaaattgggaaagatgaaatgcttcaaatgattagacatggggcaacacat
gtatttgcttcaaaagaaagtgagattactgatgaggatattgatggtattttggaaaga
ggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggtgaaagctcactt
agaaactttacaatggatacagagtcgagtgtttataactttgaaggagaggattataga
gagaaacaaaagattgcattcacagagtggattgagccacctaaacgagaaagaaaagcc
aattatgctgttgatgcctattttagggaagctcttcgtgtcagtgaacccaaagcaccc
aaggctcctcgacctccaaaacaacctaatgttcaggatttccagttctttcctccacgt
ttatttgaattattggaaaaagaaattctctattacagaaaaactattgggtataaggtg
cctcgaaatcctgacctaccaaatgcagcacaggcacaaaaagaagaacagcttaaaatt
gatgaagctgaaccccttaatgacgaagagttagaggaaaaagagaagcttctaacacag
ggatttaccaattggaataagagagattttaatcagtttatcaaagctaatgagaagtgg
ggtcgtgatgatattgaaaatatagcaagagaagtagaaggaaaaactccggaagaagta
attgagtattcagctgtattctgggaaagatgcaatgaactccaggacatagagaagatt
atggctcagattgaaaggggagaggcaagaattcaaagaagaattagtatcaaaaaagca
cttgatacgaagattggtcggtacaaagcaccttttcatcagctgagaatatcatatggt
actaataaagggaaaaactacactgaagaagaggatcgtttcctaatttgtatgcttcac
aaacttggattcgacaaagaaaacgtttatgatgaattacgacagtgtattcgcaattct
cctcagttcagatttgactggtttcttaagtccagaactgcaatggagctccagaggagg
tgtaacaccttaattaccttgattgaaagagaaaacatggaactagaagaaaaggagaag
gcagagaaaaagaagagaggaccaaaaccttcaacacagaaacgtaaaatggatggagca
cctgatggtcgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
