Mirounga angustirostris (Northern elephant seal): 123848670
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Entry
123848670 CDS
T11530
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano04151
PI3K-Akt signaling pathway
mano04382
Cornified envelope formation
mano04510
Focal adhesion
mano04512
ECM-receptor interaction
mano04518
Integrin signaling
mano04820
Cytoskeleton in muscle cells
mano04926
Relaxin signaling pathway
mano04933
AGE-RAGE signaling pathway in diabetic complications
mano04974
Protein digestion and absorption
mano05146
Amoebiasis
mano05165
Human papillomavirus infection
mano05200
Pathways in cancer
mano05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123848670 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123848670 (COL4A5)
04518 Integrin signaling
123848670 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123848670 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123848670 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
123848670 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
123848670 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
123848670 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123848670 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
123848670 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123848670 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
123848670 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
123848670 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mano04147
]
123848670 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
mano00536
]
123848670 (COL4A5)
Exosome [BR:
mano04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
123848670 (COL4A5)
Glycosaminoglycan binding proteins [BR:
mano00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123848670 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
123848670
NCBI-ProteinID:
XP_045737346
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGVKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPTGLPGPIGPRGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGMKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGPTGPPGLVIPRPGTGVTVGEKGN
IGLPGLPGEKGERGLPGIQGPPGLPGPPGTSVTGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGLPGPPGPPGPHIPPSDEICEAGPPGPPGSPGDRGLQGEQGVKGDKGDT
CFNCIGTGVSGPPGQPGLPGLPGPPGSLGFPGQKGEKGHAGLTGPKGLTGIPGAPGPPGF
PGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIAFKG
ERGLPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGVPGIGLPGPPGPKGFPGI
PGPPGAPGTPGRIGLEGPSGPPGFPGPKGEPGLGLPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGLPGHAGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGIQGPPGPPGIAGPIGQPGLHG
IPGEKGDPGPPGFDVPGLPGERGSPGIPGAPGPMGPPGTPGLPGKAGASGFPGAKGEMGM
MGPPGPPGPLGIPGRSGGPGLKGDDGLQGQPGPPGPEGEKGGKGEPGLPGPPGPVDPDLL
GSKGEKGDPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPGLT
GPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSGIGLPGLPG
PKGEPGLPGYPGNPGIKGSRGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGAKGINGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGNPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGLPGPEGPRGLPGNGGIKGERGNPGQTGQPGLPGLKGDQGPPGLQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGVPGSAGPEGDPGLVGPPGPPGLPGPSGQSIVIKGDVGPPGI
PGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGMQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPHGTVQIYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGRSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcctgcagaggctgcggcttgctatgggtgttctccaggatcaaaatgtgactgt
agtggtgtaaaaggagaaaagggggagagaggatttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatccgaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccgggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggctttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccaggcagt
ataattatgtcatcactgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcccagctggtcctactggcttaccagggccaattggtccccgaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaagggtgaaaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacagaaaagaccaattgatgtggagtttcagaaaggagatcag
ggacttcctggtgaccgaggacctcctggacctccagggatacgtggtcctccgggtcct
ccaggtggtatgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaaccg
ggtaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgaaccaggaagggatggagaaaagggccaaaaaggtgacattggcccaactggg
cctcctggacttgtaattcctaggcctgggactggcgtaactgtaggggaaaaaggaaac
attgggttacccggcttgcctggagaaaaaggagagcgaggacttcctggaatacagggt
ccaccaggccttcctggacctccagggacttcagttaccggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaaggtccacctggaatttctattcctgga
tctcctggacttgatggacagcctggggctcctggacttccagggcctcctggccctcct
ggccctcacatccctcctagtgatgagatatgtgaagcaggccctccaggccctccggga
tctccaggtgataggggactccaaggagaacaaggagtgaaaggtgacaaaggtgacacc
tgcttcaactgtattggaactggtgtttcagggcctccaggtcagcctggtctgccaggt
cttccaggtcctccaggatctcttggtttccctggacagaagggagaaaaaggacatgct
ggtctaaccggtcccaaaggattaacaggcataccaggagctccaggtcctccaggcttt
cctggatctaaaggtgaacctggtgacatcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttccccaggagcccctgggcttcctggtttacccggtacccctggacag
gatggactgccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggtctgcctgggaatccaggcttgccaggtctcccagggaatagagggcctatg
ggccctgtgggttttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
cagccagggaagcctggcctgcctggtaatccaggcagagatggtgaagtaggtcttcca
ggtgaccctggacttcccggccagccaggcttgccaggaatacccggtagtaaaggagaa
ccaggtgtccctggaattgggcttcctggaccgcctggtcccaaaggttttcctggaatt
ccgggacctccaggagcacctggaacacctggaagaattggtctagaaggcccttctggg
ccaccaggctttccaggaccgaagggagaaccaggacttgggctgcctgggccacctggg
cccccaggactcccaggtttcaaaggaacacttggtccaaaaggggatcgtggtttccca
ggacctccaggtcttccaggacatgctggcttggatgggctccctggaccaaaaggtgat
gttgggccaaacggacaacctgggccaatgggacctcctgggcttccaggaataggtatt
cagggaccaccagggccaccagggattgctggaccaataggccaacctggcctgcatgga
ataccaggagagaagggagatccggggcctcctgggtttgatgttccaggactccctgga
gagagaggcagtccagggattcctggagcacctggtcctatgggaccccccggaacacca
gggcttccaggaaaagcaggtgcctctggatttccaggtgccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtggtcctggt
ctcaaaggtgatgatggtttacagggtcagccaggacctcctggccctgaaggagaaaaa
ggtggtaaaggagagcctggccttccaggccctcctggaccagtggatccagatctgctg
ggctcaaaaggagagaaaggggaccctggcttaccaggtattcctggagtttcagggcca
aaaggttaccagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccatcaggtcccaaaggtaaccctggtctccctgggaagccaggacttaca
ggacctcctggacttaaaggaagcataggtgatatgggttttccaggccctcagggtgtg
aaagggtctcctggacctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggagaaaaaggtgatcctggtgtttcaggcattggtcttccaggtcttcccggc
ccaaagggtgaacctggtctgcctggatacccaggaaaccctggaatcaaaggttctagg
ggagatactggtttgcctggattaccagggacccctggagcaaaaggacagccaggcctt
cctggattccctggaaccccaggacttcctggagcaaaaggtattaatggtcctcctggg
aaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtcctgggccacca
gggcctccaggtgaaaaaggcaacccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcagccgggctttggaatcccaggaccccctggactcccaggactt
tctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggccttcctggt
ccaaagggagaaccaggctttcagggtttccctggtgtgcagggtcccccaggccctcct
ggttctccgggtccagctctggaaggccctaaaggcaaccctgggccccagggtcctcct
gggagaccaggtctaccaggtccagaaggtccccggggtctccctggaaatggaggtatt
aaaggagagagaggaaacccaggccaaactgggcaacctggtttgcctggtttgaaagga
gatcaaggaccaccaggactccagggtaatcctggccgaccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggcatgaagggacccagtggagta
cctggttcagctggccctgagggggatccaggacttgttggtcccccaggtccccctgga
ttacctggtccttcaggacagagtattgtaatcaaaggagatgttggtccaccagggatc
ccaggccagcctggattaaaaggtctgccaggactaccaggacctcaaggcttaccaggt
ccaattggccctccaggagatccgggacgcaatggactccctggctttgatggtgcagga
gggcgcaaaggagacccaggtctgccaggccagccaggtactcgtggtttggatggtccc
cctggaccagatggaatgcaaggtcccccaggtcctccaggaacttcctctattgcccat
ggattcctcatcacacgtcacagccagacaacagatgcaccacaatgcccacatggaact
gtccagatttatgaaggcttttctctcctgtatgttcaaggaaataaaagagctcatggt
caagacttggggacggctggcagctgccttcgtcgcttcagtaccatgcctttcatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgactattcttactggctgtcc
accccagagcccatgccaatgagcatggagcccctgaagggccggagcatccagccattt
attagtcgatgtgcagtatgtgaagctccggccgtggtgattgcagttcacagtcagacc
atccagattccccattgtcctcagggatgggattctctttggattggctattccttcatg
atgcacacaagcgcaggagcagagggctcaggtcaagccttggcctcccctggttcctgc
ttggaagagtttcgttcagctcccttcattgaatgtcatgggcggggtacctgcaactac
tatgccaactcctacagcttttggctagcaactgtagatgtgtcagacatgttcagcaaa
cctcagtcagaaacgctgaaagcaggagacttgaggacacgtattagccgatgtcaagtg
tgcatgaagaggacataa
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integrated database retrieval system
