KEGG   Mirounga angustirostris (Northern elephant seal): 123855321
Entry
123855321         CDS       T11530                                 
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X1
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
mano  Mirounga angustirostris (Northern elephant seal)
Pathway
mano03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mano00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    123855321 (UTP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mano03009]
    123855321 (UTP4)
Ribosome biogenesis [BR:mano03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    123855321 (UTP4)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40 WD40_Prp19 Beta-prop_WDR5 WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_HPS5 WD40_Gbeta Beta-prop_EML Beta-prop_Aladin Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_VPS8 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_BBS7 Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_IFT140_1st PQQ_2 Tor_FN3_1st
Other DBs
NCBI-GeneID: 123855321
NCBI-ProteinID: XP_064436872
LinkDB
Position
Unknown
AA seq 695 aa
MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAKGQRLFSAGLNGEIIEYDLQALNIKYAVDAFGGPIWSMAISPHGSQLLVGC
EDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPSGTHVAAGSIDYISVFDVKSGSAVH
KMLVDRQYMSVSKRKCIIWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKNHLVASADVQ
SIAVSDQEDSFVVGTAEGTVFHFQLVSVTSNSSEKQWVRTKPFQHHTHDVRAVAHSPTAL
ISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLISCSKKRQLLLFQFAHHLELWRL
GSTVATGKPWKFLVPGKNGDTLPLSKDADHLLHLKTKGPENIICSCISPCGSWIAYSTTS
RFFLYRLNYEHDNISLQRVSKMPAFLRSALQILFSEDSTKLFVASNQGSLHAIRLLEGSF
KHLHTFQPQSGTVESMCLLAVSPDGNWLAASGTSAGVHVYNIKHLKLHCTVPSYNFPVTA
LAIAPNTNNLVIAHSDQQVFEYSIPDKQYTEWSRTIQKQGFHYLWLQRDTPITHISFHPK
RPMHILLHDAYMFCIIDKSLPLPNDKTLLYNPLPPTNESDVIRRRTAHAFKISKIYKPLL
FMDLLDERTLVAVERPLDDIIAQLPPPIKKKKFGT
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgggtgaatttaaggtccatcgagtacgtttctttaattatgttccatcagggatccgc
tgtgtggcttacaataaccagtcaaacagattggctgtttctcgaacagatggcactgtg
gaaatttataacttgtcagcaaactactttcaggaaaaattttttccaggtcatgaatct
cgggctacagaagctctgtgttgggcaaaaggacagcgactctttagtgctggactcaat
ggagaaattatcgagtatgatttgcaggcattaaacatcaagtatgccgtggatgccttt
ggaggacccatttggagtatggctatcagtccccatggttctcagcttttggttggctgt
gaagacggatctgtgaagctatttcaaatcaccccagacaaaatccagtttgaaagaaat
tttgatcggcagaaaagtcgcatcctgagtctcagctggcatccctccggtacccacgtt
gcagctggctccatagactacatcagtgtgtttgatgtcaaatcagggagtgctgttcat
aagatgctggtggataggcagtatatgagtgtgtctaagcggaagtgtatcatatggggc
gtggccttcttgtctgatggcactgtcataagtgtggactctgctgggaaggtgcagttc
tgggactccgctactgggacgcttgtgaagaaccatctcgttgccagtgctgatgtgcag
tccattgcagtatctgatcaagaagacagtttcgtggtgggcacagccgaggggacagta
ttccattttcagctggtctctgtgacttccaacagcagtgagaagcagtgggtgcggaca
aagccattccagcatcatacacatgacgttcgagccgtggcccacagcccgacagcactg
atatctggaggcactgacacccatttagttatccgacctctcatggagaaggtggaggtt
aagaattatgatgctgctctcagaaaaatcacttttccccatcgacgtctcatttcctgt
tcaaaaaagaggcagcttctccttttccagtttgctcatcacttggaactttggcgactg
ggatctacagttgcaacaggaaaaccttggaaatttcttgttccaggaaagaatggggat
acccttccactttctaaagatgcagatcatttgctgcacctcaaaacaaagggtcctgag
aacattatttgcagctgtatctccccttgtggaagttggatagcctattctacaacttct
cggttttttctttatcggttgaattatgaacatgacaacataagcctccaaagggtttcc
aaaatgccagcgttccttcgctctgctcttcagattttgttttctgaagattcaacaaaa
ctcttcgtggcatcaaatcaagggtctctacatgccattcggctattggaaggaagcttc
aagcacctgcatactttccagcctcagtcagggacggtggagtccatgtgtcttttggca
gtcagtccagatgggaattggctagctgcatcagggaccagtgctggagtccatgtgtac
aacataaaacatctgaagcttcactgcaccgtaccttcctataatttccctgtgactgct
ctggccattgcccccaataccaacaaccttgtcattgctcattctgaccagcaggtattt
gagtacagtatcccggacaagcagtatacagagtggagccggaccatccagaagcagggc
tttcattatctttggctgcagagggatactcccatcacacacatcagttttcatcccaag
agaccaatgcacatccttctccatgatgcatacatgttctgcatcatcgacaagtcattg
cctcttccaaatgacaaaaccttactctacaatccacttcctcccacgaacgaatcagat
gttatcaggaggcgtaccgcccatgcctttaaaatttctaagatatataagcctctgctc
ttcatggatcttttggatgaaagaacactggttgcagtagaacggcccctggatgacatc
attgctcagcttccaccacccatcaaaaagaagaaatttgggacctaa

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