Mirounga angustirostris (Northern elephant seal): 123855654
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Entry
123855654 CDS
T11530
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123855654 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mano03021
]
123855654 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
mano03019
]
123855654 (SUPT5H)
Transcription machinery [BR:
mano03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123855654 (SUPT5H)
RNA polymerase I system
123855654 (SUPT5H)
Messenger RNA biogenesis [BR:
mano03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
123855654 (SUPT5H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW
KOW4_SPT5
KOW2_Spt5
KOW5_SPT5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
123855654
NCBI-ProteinID:
XP_045747459
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSVAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtgaggacagcaatttctccgaggaggaggatagcgagcgcagcagtgac
ggcgaggaggccgaggtggaggaagagcggcggagtgtagcaggcagtgagaaggaggaa
gagcctgaggaagaagaggaggaggaagaggaggaagaatatgatgaggaagaggaagag
gaagatgatgaccggcctcccaagaaaccccgccacggcggcttcattctggacgaggct
gatgtggacgatgagtatgaggacgaggaccagtgggaggacggagcagaggacattcta
gagaaagaagagatcgaagcctccaatatcgataatgttgtcctggatgaagaccgttct
ggggctcgccgcctacaaaacctctggagggaccagcgagaggaagaactgggcgagtat
tacatgaagaaatatgccaagtcgtctgtgggagagacggtgtatggaggatctgatgag
ctctcggatgacatcacccagcaacagctgctcccaggagtcaaggatccaaatctgtgg
actgtcaaatgtaagatcggggaggaacgggccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagattaagtcagtggtggcgccggagcat
gtgaagggctacatctacgtggaggcctacaagcagacgcacgtgaagcaggccatcgag
ggtgtgggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggagatg
acagatgtgctcaaagtcgtgaaggaggtggccaacctgaagcccaaatcctgggtccgc
ctcaagaggggcatctataaggacgacatcgcccaggtggattatgtggaacccagccaa
aacaccatctccttgaagatgatcccccgcattgactacgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacagaggctgttc
gatgccgagaagatcaggtccctgggcggtgatgtggcctccgatggtgacttcctcatc
ttcgaggggaaccgttatagccggaagggctttctgttcaagagctttgccatgtctgcc
gtgatcacggagggtgtgaagcccacgctctctgagctggagaagtttgaggatcagccg
gagggcattgaccttgaggtggtgactgagagcacagggaaggagcgggaacacaacttc
caacctggggacaatgtggaggtgtgtgagggcgagctcatcaacctgcagggcaaaatc
ctcagcgtggatggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttcccagcccaggagcttcggaagtactttaaaatgggggaccacgtaaaggtg
attgctggccgatttgagggtgacacaggcctcattgtgcgggtggaggagaacttcgtc
atcctcttctctgatctcaccatgcatgagctgaaggtgctcccccgggacctgcagctc
tgctcagaaacggcatcgggcgtggatgtagggggccagcatgagtggggggagctggtg
cagctggaccctcagaccgtgggtgtcatcgtgcgactggagcgggagaccttccaggtg
ctgaacatgtatgggaaggtggtgaccgtcaggcaccaggctgtgacccggaagaaggac
aaccgctttgccgtggctctggactcggaacagaataacatccatgtgaaggacatcgtc
aaggtcattgacggcccccactcaggccgggagggcgaaattcgccatctgttccgcagc
ttcgccttcctgcactgcaagaaactggtggagaatgggggcatgtttgtctgtaagacc
cgccacctcgtcctggcagggggatccaagccccgagatgtgaccaacttcacagtgggt
ggctttgcccccatgagcccccggatcagcagtcccatgcaccccagtgctggaggtcag
cgcggtggctttggcagccccggtggcggcagcggaggtatgagcaggggccgggggcgg
agagacaacgagctcatcggccagactgtgcgcatctcccaaggaccctacaaaggctac
attggtgtggtgaaggacgccaccgagtccacagcccgcgtggagctgcactccacctgc
cagaccatctctgtggatcgtcagcggctcacgacggtgggctcacggcgcccgggaggc
atgacctcaacctatgggcggacgcccatgtacggctcccagacgcccatgtatggctct
ggttcccgcacacccatgtatggctctcagacccctctccaggatggcagccgcaccccg
cattatggttcacagacacccctgcatgacggcagccgcactcctgctcagagtggggcc
tgggaccccaacaatcccaacacgccgtcccgggccgaggaagaatacgagtatgccttc
gatgacgagcccaccccgtccccacaggcctatgggggcacccccaacccccaaacacct
ggctatcctgacccctcatccccacaggtcaaccctcagtataacccacagacgccaggg
acgccagccatgtacaacacagaccagttctccccctatgccgccccctccccgcaaggc
tcctaccagcccagccccagcccccagagttaccaccaggtggcgccaagcccagcaggc
taccagaatacccactctccagccagctaccaccccacaccctctcccatggcctatcag
gccagccccagcccgagccctgttggctacagtccgatgacacccggagccccctcccct
ggtggctacaacccgcacacgccaggctcaggcattgagcagaactccagcgactgggta
accactgatatccaggtgaaggtgcgggacacctacctggatacgcaggtggtggggcag
acaggagtcatccgcagcgtcacaggaggcatgtgctctgtgtacctaaaggacagtgag
aaggtggtcagcatctccagcgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaggtgattctgggtgaggatcgggaagccacaggggtcctgttgagcatcgatggt
gaggacggcatcgtccgcatggaccttgatgagcagctcaagatcctcaacctccgcttc
ctggggaagctcctggaggcctga
DBGET
integrated database retrieval system
