Mirounga angustirostris (Northern elephant seal): 123859310
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Entry
123859310 CDS
T11530
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123859310 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mano03041
]
123859310 (PRPF38B)
Spliceosome [BR:
mano03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123859310 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
123859310
NCBI-ProteinID:
XP_045753028
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGGGATKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRG
VGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWF
ESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPR
KIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELERE
KERQRLEREAKEREKERRRSRSIDRGLERRRSSRSRERHRSRSRSRDRKGDRRDRDRERE
KENERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKK
DSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQG
RTDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQEK
QHKNKDETV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgcg
gccgcggcccagcagcagcagcagtgcggcggtggcggcggcggcgccaccaagccggcg
gtctcgggcaagcagggaaatgtgctgccgctctggggcaacgagaagactatgaacctc
aaccccatgatcttgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgag
ctcaagacctaccacgaggtggtggacgagatctactttaaggtcacgcatgttgaaccg
tgggagaaaggaagcaggaaaacagcaggccaaacggggatgtgcggaggggttcgaggt
gttggaacaggaggaattgtttctacagctttctgcttgttatacaaattatttactttg
aagctaactcgcaagcaagtgatgggtctcataacacacacagactctccatatattaga
gcccttggatttatgtatataaggtacacacagccccctacagatctatgggactggttt
gaatccttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatg
accattggagaaatgctacggtcttttctcacaaaactggagtggttttctaccctgttt
ccaagaattccggttccagttcagaagaatattgatcaacagattaaaacccggcctaga
aaaatcaagaaagatgggaaggaaggtgctgaggaaatagacagacacgttgaacgcagg
cgttcaaggtctccaaggaggtcactgagtccacggaggtccccaagaagatcaagaagt
agaagccatcatcgggagggccatgggtcttctagttttgatcgagaattagaaagagag
aaagaacgccagcgactagagcgtgaagccaaagaaagggagaaagaaaggcggagatcc
cgaagtattgatcggggattggaacgcaggcggagtagcaggagtagggaaaggcataga
agtcgtagtcgaagtcgggataggaaaggggatcgaagggacagggatcgggaaagagag
aaagaaaatgagagaggtagaagacgagatcgtgactatgataaggaaagaggtaatgac
cgagaaaaggagcgagagcgatcaagagaacggtccaaggaacggagaagtaggggtgag
gtagaagagaagaaacacaaagaagataaagatgataggcggcatagagatgacaaaaaa
gattccaagaaggagaaaaaacacagtaggagtagaagcagagaaaggaaacacagaagt
aggagtagaagtagaaatgcagggaaacgaagcagaagcaggagcaaagagaaatcaagt
aaacataaaaatgaaagtaaagaaaaatcaaataaacgaagtagaagtggcagtcaagga
agaactgacagtgttgaaaaatcaagaaaacgggaacatagccccagcaaagaaaagtct
agaaagcgtagcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggac
cagtctgacaaacatgatcgtcgaaggagccaaagtatagaaccagagagccaagaaaaa
caacataaaaacaaagatgagactgtgtga
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