Mirounga angustirostris (Northern elephant seal): 123859681
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Entry
123859681 CDS
T11530
Symbol
PTCH2
Name
(RefSeq) protein patched homolog 2 isoform X1
KO
K11101
patched 2
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano04340
Hedgehog signaling pathway
mano05200
Pathways in cancer
mano05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
123859681 (PTCH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123859681 (PTCH2)
09162 Cancer: specific types
05217 Basal cell carcinoma
123859681 (PTCH2)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
123859681
NCBI-ProteinID:
XP_045753790
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MYLILRKVSVPSSGMYGGRAGETRNRVKYFPSLGLCVGPTCPASRNQEAGAWQRVHIRRK
GEDFMHCYSNAWLTLLFPSQILAGSLKAPLWLRAYFQGLLFSLGCGIQRHCGKVLFLGLL
AFGALALGLRVAIIETDLEQLWVEVGSRVSQELHYTKEKLGDEAAYTSQMLIQTPLQEGE
NVLTPEALGLHLQAALTASKVQVSLYGKSWDLNKICYKSGIPLIENGMIERMIEKLFPCV
ILTPLDCFWEGAKLQGGSAYLPGRPDIQWTNLDPEQLLEELGPFASLEGFRELLDKAQVG
QAYVGRPCLHPDDLHCPPSAPNHHGKQAPNVAQELSGGCHGFSHKFMHWQEELLLGGISR
DPRGQLLRAEALQSTFLLMSPRQLYEHFRGDYQTHDIGWSEERAGTVLQAWQRRFVQLAQ
EALPQNSSQQIHAFSSTTLDDILHAFSEVSAARVAGGYLLMLAYACVTMLRWDCAQSQGA
VGLAGVLLVALAVASGLGLCALLGIAFNAATTQVLPFLALGIGVDDIFLLAHAFTEAPPG
TPLQERTGECLQRTGTSVALTSINHMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVML
VFPAVLSLDLRRRRCQRLDVLCCFSRPCSARVIQILPRELGDGTGPVGIAHLTATVQAFA
HCEASSQHVVTILPPRACLVPPPSDPLDSELFSPGGSTRDLLSQEEGTRQKATCSSLPCA
RWSLAHFARYQFAPWLLQAHSKAMVLVLFGALLGLSLYGATLVQDGLALTDVVPRGTKEH
AFLSAQLRYFSLYEVALVTQGGFDYAHSQRALFDLHQRFSSLKAVLPPPATQAPRTWLHY
YRNWLQGIQAAFDQDWASGRISHHSCRNGSEDGALAYKLLIQTGDTQEPLDFSQLTTRKL
VDKEGLIPPELFYVGLTMWVSSDPLGLAASQANFYPPPPEWLHDKYDTTGENLRIPAAQP
LEFAQFPFLLHGLQKTADFVEAIEGARAACAEAGRAGVRAYPTGSPFLFWEQYLGLRRYF
LLAICILLVCTFLVCALLLLNPWTAGLIVLVLAMMTVELFGIMGFLGIKLSAIPVVILVA
SVGIGVEFTVHVALGFLTTQGSRNLRAACALECTFAPVTDGAVSTLLGLLMLAGSNFDFI
IRYFFVVLTVLTLLGLLHGLVLLPVLLSILGPPPEVVQMYKESPEVLSPPAPQEGGLRWG
LSPTLPQSFARVTTSVTVALHPPPLPGAYIHPASDEPPWSPVATPAASAPSSLSSRGPCP
ATG
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttattctcagaaaagtatccgtgccttcctccggtatgtatggggggcgggcg
ggagagaccaggaatagagttaaatattttccatctttgggactctgtgtaggtcctacc
tgtcctgcatccagaaaccaagaagctggggcttggcagagggtgcacataaggagaaaa
ggggaggatttcatgcattgttacagtaatgcctggctgacacttctctttccatcccag
atcctagctgggagcctgaaggctccactctggcttcgtgcttacttccaggggctgctc
ttctctctgggctgtgggatccagagacactgtggcaaagtgctcttcctgggcctgttg
gcctttggagccctggcactgggtctccgcgtggccatcattgagacagacctagaacag
ctctgggtggaagtgggcagccgggtgagccaggagttacattacaccaaggagaagctg
ggggacgaggctgcatacacctcccagatgttgatacagaccccactccaggaaggggag
aatgtcctcacacctgaggcacttggcctccacctccaggcagccctcaccgccagtaaa
gtgcaagtatcactctatggaaagtcctgggatttgaacaaaatctgctacaagtcagga
attcccctaattgaaaatggaatgattgaacggatgattgagaagctgtttccgtgcgtg
atcctcacccccctcgactgcttctgggagggagccaaactccaagggggctccgcctac
ttgcccggccgtcctgacatccagtggaccaacctggatccagagcagctgctggaggaa
ctgggcccctttgcctccctcgagggcttccgggagctgctagacaaggcacaggtgggc
caggcctatgtggggcggccctgtcttcaccctgacgatctccattgcccgcctagtgcc
cctaaccatcacggcaagcaggctcccaatgtggctcaggagctgagtgggggctgccac
ggcttctcccacaagtttatgcactggcaggaggaattgctgctggggggcatctccaga
gacccccgaggacagctgctgagggcggaggccctgcagagcaccttcctgctgatgagt
ccacgccagctgtatgagcacttccgaggcgactaccagacgcatgacatcggctggagc
gaggagcgggccggcacagtgctgcaagcctggcagcggcgctttgtgcagctggctcag
gaggccctgcctcagaattcatcgcagcagatccacgccttttcctccaccaccctggat
gacatcctgcacgccttctctgaagtcagtgctgcccgcgtggcgggaggctatctgctc
atgctagcctatgcctgtgtgacaatgctgcgctgggactgtgcccagtcccagggtgcg
gtgggccttgcaggggtgctgctggtagccctggcagtggcctcgggccttgggctctgc
gccctgcttggcatcgccttcaatgctgccactacccaggtgctgcccttcctggcactg
ggcatcggtgtggatgacatattcctgctggcacatgccttcacagaggccccccctggc
acccctctccaggagcgcacaggtgagtgtctgcagcgcacggggaccagcgtggcgctc
acatccatcaaccacatggtggccttcttcatggccgccctcgttcccatccctgcactg
cgggccttctccttgcaggcagccatagtggtcggctgcaacttcgcagccgtgatgctt
gtcttcccggcggtcctcagcctggacctgcgccggcgccgctgccagcgccttgacgtg
ctctgctgcttctctaggccctgctctgctcgggtgattcagattctgccccgggagcta
ggggatgggacaggaccagtgggcattgcccacctgacggccacagttcaagccttcgcc
cactgcgaagccagcagccagcatgttgtcaccatcctgcccccccgagcctgcttggtg
cccccaccttccgacccactggactctgagctcttcagcccaggagggtccacacgggac
ctcctaagccaagaggaggggaccaggcaaaaggcaacctgcagctccctgccctgtgcc
cgctggagtcttgcccatttcgcccgctatcagttcgcaccctggctgctccaggcgcac
agcaaggccatggtgctggtgctctttggggctcttctgggcctgagcctctacggagcc
accctggtgcaggacgggctggccctgacggatgtggtgcctcggggcaccaaggagcat
gccttcctgagcgcccagctcaggtacttctccctgtacgaggtggccctggtgacacag
ggtggctttgactacgcccactcccaacgcgccctctttgatctgcaccagcgcttcagt
tctctcaaggccgtgctgcccccccctgccacccaggcgccccgcacctggctgcactat
taccggaactggctacaggggatccaggctgcctttgaccaggactgggcttccgggcgc
atcagccaccactcgtgccgcaacggctccgaggatggggcgctggcctacaagctgctc
atccagaccggggatacccaagagcctctggatttcagccagctgaccacaaggaagctg
gtagataaggaggggctgattccacccgagctcttctacgtggggctgaccatgtgggta
agcagtgacccgctgggcctggcggcctcacaggccaacttctatcccccacctcccgag
tggctacatgacaagtacgacaccaccggggagaaccttcgcatccccgcagcccagccc
ctggaatttgcccagttccccttcctactgcatggcctccagaagaccgcggacttcgtg
gaggccatcgagggggcccgggcagcgtgcgccgaggcaggccgggccggggtgcgtgcc
taccccaccggctcccccttcctcttctgggagcaatatctgggcctgcggcgctacttc
ctgctggctatctgcatcctgctggtatgcactttcctcgtctgtgccctcctgctgctc
aacccctggacggccggcctcatagtactggtcctggcgatgatgactgtggagctcttt
ggcatcatgggtttcctgggcatcaaactgagtgccatccccgtggtgatccttgtggcc
tctgtaggcattggtgttgagttcacggtccacgtggctctgggcttcctgaccacccag
ggtagccggaacctgcgggctgcctgtgccctagagtgcacatttgctccagtgaccgat
ggggccgtctccacattgctgggtctgctcatgcttgctgggtccaactttgacttcatc
ataaggtactttttcgtggtgctaacagtgctcacgctcctgggcctcctccatgggctc
gtgctgctgcccgtgctgctgtccatcctgggccccccaccagaggtggtacagatgtac
aaggagagcccggaggtcctcagccccccagctccacaggaaggagggctcaggtggggg
ttgtcccccaccctgccccagagctttgccagagtgactacctccgtgacggtggccctc
cacccacccccactgcctggtgcctacatccatccagcctccgatgagcccccttggtcc
cctgttgccacaccagctgccagcgcccctagcagcctcagttctaggggaccatgtcca
gccactgggtga
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