Mirounga angustirostris (Northern elephant seal): 123860630
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Entry
123860630 CDS
T11530
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X2
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mano Mirounga angustirostris (Northern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mano03021
]
123860630 (CHD1)
03036 Chromosome and associated proteins [BR:
mano03036
]
123860630 (CHD1)
Transcription machinery [BR:
mano03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123860630 (CHD1)
Chromosome and associated proteins [BR:
mano03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123860630 (CHD1)
SLIK complex
123860630 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
123860630
NCBI-ProteinID:
XP_045755188
LinkDB
All DBs
Position
Unknown
AA seq
1707 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSESGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAVLKKQQQQQQASSNSGSEED
SSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYEPK
NKVKSRKPQNRSKAKNGKKILGQKKRQIDSSEEEDDEEDYDNDKRSSRRQATVNVSYKED
EEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDPNA
GFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKN
ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWED
GALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELRDYQ
LNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSW
QREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLGG
LNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKF
SSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQY
YKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIR
SSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK
QVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEEL
SAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANFS
NMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGS
EGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPL
ERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTFRIS
GVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIGI
YEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEAQRL
SGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKLSESKSDSKERSKK
SSVSDAPVHITASGEPVPISEESEELDQKTFSICKERMRPVKAALKQLDRPEKGLSEREQ
LEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKK
RQESQQNNDQNSNLNAQVIRNPDVERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQG
DSYKKSDSRKRPYSSFSNGKDHRDWDHYKQESRYYSDREKHRKLDDHRSRDHRSNLEGSL
KDRSHSDHRSHSDHRLHSDHRASSEYTHHKSSRDYRYHSDWQMDHRASSSGPRSPLDQRS
PYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctcaggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgaatctggatctgaatcgggcagt
cagtcagagtctgaatcagacacttcccgagaaaacaaagtccaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgca
gtgctcaagaagcagcagcagcagcagcaggcttcatctaatagtggatcagaggaggat
tcctccagcagtgaagattctgatgactcatcgaatgaggtcaaaaggaaaaagcataaa
gatgaagattggcaaatgtctgggtcaggatctccatctcaatctggttcagattcagaa
tctgaagaagaaagagataaaagcagttgtgatgaaacagaatctgattatgagccaaaa
aacaaagttaaaagcagaaaacctcaaaatagatctaaggcaaaaaatgggaagaaaatt
cttggacaaaaaaagagacagattgattcatctgaggaggaagatgatgaagaagattat
gataatgataaaagaagttctcgtcgccaagcaactgtcaatgttagctataaagaagat
gaagaaatgaaaacagattctgatgatctactggaagtctgtggggaggatgttcctcaa
cctgaggaagaggaatttgaaacaatagaacgttttatggattgtcggattgggagaaaa
ggagctactggtgctactacaaccatctatgcagttgaagcagatggtgacccaaatgca
ggatttgaaaaaaacaaggaaccaggcgagatccaatatttaattaaatggaaaggatgg
tcccatattcacaatacttgggagacagaagaaacccttaagcagcagaatgttagagga
atgaaaaaattggataattataagaaaaaagatcaggaaacaaaaagatggttgaaaaat
gcttctccagaagatgtggaatattataattgccagcaagaactcacagatgatctacac
aaacagtatcaaatagtggaacgaataattgctcattccaatcagaagtcagcagctggt
tatcctgattattattgcaaatggcagggccttccatactcagagtgcagctgggaggat
ggagctctaatttccaaaaagtttcaagcatgcatagatgagtattttagcaggaatcag
tcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggccaagatttgtagcc
ctaaagaagcagccatcctatattggaggacatgagagtttagaattaagagattatcaa
ctgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgcatacttgct
gatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactatttatttcat
gaacatcaattatatggaccttttctgttagtagtaccactttccactcttacttcctgg
caaagggaaattcagacatgggcttctcaaatgaatgctgtggtttatttaggtgacatt
aacagcagaaatatgataagaactcatgaatggatgcatccccagaccaaacggttaaaa
tttaatatacttttaacaacttacgaaattttattgaaggataaggcattccttggaggt
ctaaattgggcttttataggtgtagatgaagcacatcgattaaagaatgatgactctctc
ctgtataaaactttaatagactttaagtccaatcaccgtctccttattactggaactcct
ctacaaaactccctcaaagagctctggtctttgctacatttcattatgccagaaaagttt
tcttcctgggaagattttgaagaagaacatggaaaaggcagagaatatggttatgcaagc
ctccacaaggagcttgagccgtttctgttacgcagagttaaaaaagatgtggaaaaatct
cttcctgccaaggttgaacagattttaagaatggaaatgagtgctttacagaaacagtat
tacaaatggatattaactaggaattacaaagccctcagcaaaggttccaagggcagtacc
tcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgctacctcatt
aaaccaccagataataatgaattctataataaacaggaggccttacaacacttaatccgt
agtagcggaaaattgattcttcttgacaaactgttaattcgcctaagagaacgaggcaat
agagttcttattttttctcaaatggtgcggatgttagatatacttgcagaatatttgaaa
taccgtcaattcccctttcaaagattagatggatcaataaaaggagaactgagaaaacaa
gctctagatcattttaatgctgaaggatcagaggatttctgctttttgctttccacgaga
gctggaggcctgggaattaatttagcctctgctgacactgttgttatatttgattctgat
tggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattgggcagaagaaa
caggtgaatatttatcgtctagttacaaagggatcagttgaagaggatatacttgaaagg
gcgaaaaagaagatggttttggatcaccttgtgattcagagaatggacacaactgggaag
acagtactacatacaggttctgccccctcaagttctactcctttcaataaagaagaatta
tcagccattttaaagtttggcgctgaggagctttttaaggaacctgaaggagaagaacaa
gagccccaggaaatggatatagatgagatcttgaagagggctgaaactcatgaaaacgaa
ccaggccctttaactgtaggagatgaattgctttcccagttcaaggttgccaacttttca
aatatggatgaggatgacattgagttggaaccagaaagaaattcaaagaattgggaagaa
ataattccagaagatcaaagaagacgattagaagaggaagaaagacaaaaggaacttgaa
gaaatttatatgctcccaagaatgagaaactgtgcaaaacagattagttttaatggaagt
gaagggaggcgcagtagaagtaggagatactctggatctgatagtgactcgatctcagaa
aggaaaaggccaaagaaacgtggaagaccacggactattcctcgagagaatatcaaagga
tttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggtggccctctg
gaaagattagatgcaattgctcgggatgctgaattagttgataagtcagagacagacctc
agacgactaggagaattggtgcataatggttgcattaaagctttaaaggataattcttca
ggaacagaacgaacaggtggtagacttggaaaagtgaagggtccaacattccgaatatca
ggtgtacaggtgaatgccaagcttgtcatctcccatgaagaagaattaataccattgcac
aaatccattccgtcagatcccgaagaaagaaaacagtatactatcccatgccacacaaag
gcagctcattttgatatagactggggcaaagaagatgattccaatttgttaattggtatc
tacgaatacggatatggaagctgggaaatgattaaaatggatcctgacctcagtttaaca
cacaagattcttcctgatgatcctgataaaaaaccacaagcaaagcagttgcagacacgt
gcagactacctcatcaaattacttagtagagatcttgcaaaaaaagaagctcagagactt
tctggtgcaggaggatcaaagaggagaaaagcaagagctaagaagaataaagcaatgaag
tctataaaagtgaaagaagaaataaagagtgattcttcgcccctgccttcagagaaatcc
gatgaagatgatgataagttgagcgaatccaagtctgatagcaaggaaagatccaagaaa
tcttcagtgtcagatgctccagttcatatcaccgcaagtggtgaaccagttcccatatct
gaagaatctgaagagctagatcagaagacattcagcatttgtaaagaaaggatgaggcct
gtcaaagcagctttgaaacaacttgataggcctgaaaaaggcctttcagaaagagaacaa
ctggagcatactagacagtgtttaataaaaattggagaccatatcacagaatgtctgaaa
gagtatacaaatcctgaacaaatcaagcagtggagaaaaaacctgtggatttttgtatct
aagtttacggagtttgatgcaagaaaattacataaattatataaacatgctattaaaaaa
cggcaggaatctcagcaaaataatgaccagaacagcaacttgaatgctcaagtgattaga
aatccagatgtggaaagattaaaagagaatacaaatcatgatgatagcagcagggacagt
tattcatctgacagacacttatctcagtatcatgatcatcataaagaccgacatcaggga
gattcttacaaaaagagtgactctaggaaaagaccctattcttcttttagcaatggtaaa
gatcatcgtgactgggatcattacaagcaggaaagcaggtattacagtgatagagagaaa
cacagaaaactggatgatcacaggagtagagatcacaggtcaaatttggaaggaagttta
aaggatagatctcattctgatcatcgttctcattcagaccatcggttacattcagaccat
cgggcaagttctgaatatacacaccataaatcttccagggattataggtatcactcagat
tggcaaatggaccacagagcttccagtagtggccccagatcaccactagatcagaggtct
ccttatggctccagatctccatttgaacactcaattgaacacaaaagtacacctgagcat
acctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
