Mirounga angustirostris (Northern elephant seal): 123861384
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Entry
123861384 CDS
T11530
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano03015
mRNA surveillance pathway
mano03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123861384
09123 Folding, sorting and degradation
03018 RNA degradation
123861384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mano03019
]
123861384
03041 Spliceosome [BR:
mano03041
]
123861384
Messenger RNA biogenesis [BR:
mano03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123861384
mRNA cycle factors
Stress granule specific factors
123861384
Spliceosome [BR:
mano03041
]
Complex C
Other components
Complex C specific factors
123861384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_occluded
RRM_10
RRM_3
RBD_RDR6
POP1_C
Motif
Other DBs
NCBI-GeneID:
123861384
NCBI-ProteinID:
XP_045756420
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MSASVPHFEMSTLYVGDLHPEVNEAMLYEKFSSAGPILSIRLCRDLVTRRSLGYAYVNFL
LWADTEWALDTMNFDIINGKPLRIMWSQRDPSLRKSGVGNIFIKNLAKSIDNKSLYDTFS
VFGNILSCKVVTDENGSRGFGFVHFEKSEAAKRAIAKMNVILLKGSRVFVGQFKPRKERE
AELRAKANIFTNVYIKNFGDDVDDECLKEVFGEFGSVLSVRVMTDESGKSKGFGFVNFEN
FEDAKKAIEKMNGKVLNGNQIYVGRAQKKLERQSELKHKFEQIKQGKLTKCKGANLYVKN
LEDDIDDRRLREEFSLFGTISSARVMMEAGHSKGFGFVCYTSPEEANKAVMAMNGKIVIT
KPLYVAIAQSKDERQAFLTKNYMERISAVRDGDNAILNYQKITSSNNFIPILPQSQCGNV
HLYKPVVRAKYHPSQNLHYATHSVAAPKPSISTFIQPQVPGVKSTYQITNMTTPKMAVYP
QTSALRPPANQRFKKVTAIANVCRPLKFKVGRPASNQKPIPVGHDISNVSVWASATTQKN
ILGQKLVPLVQSIHPTLAGKISRILLEMDDSELLHMLESPESLRSKVDEAVVVLQAHQAK
EAAQKAVNSTTGVKTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttcagttccccactttgaaatgtccacactctatgtcggagacctgcacccc
gaagtgaatgaggcaatgctgtatgagaaattcagctctgctgggccaatcctttccatt
cggctgtgccgtgatctggtaacgcgccgctctctgggctacgcttacgtgaacttcttg
ctgtgggctgatactgagtgggctctggacactatgaactttgatattatcaatggcaag
ccactgcgtattatgtggtcccagcgtgacccatcacttcgtaagagtggagtgggcaat
atattcatcaaaaatcttgccaagtctattgataataagtccctttatgacacattttct
gtctttggaaacattctttcttgtaaagtagtaaccgatgaaaacggatccaggggtttt
ggatttgtgcattttgagaaatcggaagctgctaaaagggccattgcaaagatgaatgtt
attctgctgaagggtagccgagtttttgttgggcagtttaaacctcgcaaagaaagggaa
gcagagctgagagctaaagcaaacatatttaccaatgtttacatcaaaaattttggagat
gatgtagatgatgaatgtcttaaagaggtttttggtgagtttggttctgtattaagtgta
agagttatgactgatgaaagtggaaaatccaaagggtttggatttgtgaattttgagaat
tttgaagatgccaagaaagccattgaaaagatgaatggaaaagtccttaatggaaatcaa
atttatgttggtagagcccagaaaaaactagagagacaatctgaactaaaacataaattt
gaacaaataaaacagggtaaactcaccaagtgcaagggtgctaacctttatgtgaaaaat
cttgaagatgatattgatgacagacgactgagagaagaattctccctctttggcacaatc
tctagtgccagggtcatgatggaggcaggccacagcaaaggctttggttttgtttgttat
acatctcctgaggaagctaataaagctgtcatggcaatgaatggaaaaattgtgatcacc
aaaccactgtatgtggctattgcacaaagtaaggatgagcgccaggctttcctcaccaag
aactatatggaaagaatctcagctgtgagagatggagataatgctatactcaactatcaa
aagataacatcatccaataacttcataccaattcttcctcagtctcaatgtggcaatgta
catctttacaagcctgtggtaagggccaaatatcatccatctcagaatttacattatgct
acccactcagtagcagcgcctaagccatcaatcagcactttcatacagccacaagtgcca
ggggtcaagtcaacctatcaaatcaccaatatgacaaccccgaaaatggctgtttaccct
caaacttctgctttaagaccacctgcaaaccaaagattcaaaaaagttacagctattgca
aatgtctgcaggcctcttaaatttaaagtaggaaggccagcatccaaccagaagcctatc
cctgttggtcatgatatttcaaatgtgtctgtgtgggcatcagctactactcagaagaat
atcttgggtcaaaagctggtacctctggttcaatccattcacccaactctggctggaaaa
atctctagaatactgttggagatggatgattctgaacttcttcatatgcttgagtctcca
gagtctctccgttctaaagttgatgaagctgtagttgtactacaagcccaccaagctaaa
gaggctgcccagaaagcagttaacagtaccactggtgttaaaactgtttaa
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