Mirounga angustirostris (Northern elephant seal): 123863129
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Entry
123863129 CDS
T11530
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X5
KO
K06823
collagen type XVIII alpha
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123863129 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mano04147
]
123863129 (COL18A1)
00535 Proteoglycans [BR:
mano00535
]
123863129 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
mano00536
]
123863129 (COL18A1)
Exosome [BR:
mano04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123863129 (COL18A1)
Proteoglycans [BR:
mano00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
123863129 (COL18A1)
Glycosaminoglycan binding proteins [BR:
mano00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
123863129 (COL18A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
123863129
NCBI-ProteinID:
XP_045758289
LinkDB
All DBs
Position
Unknown
AA seq
1722 aa
AA seq
DB search
MARLPGSRLGPPLLLLLVTYCLAAAHADLLSLNWLWSTRTDGPTAELVSEPPGSPHGQPR
EDTSTHAAPQHGPTEQGRGPASPELPVERPETGLGGASPAGPDTKEENIAGVGAKILNVA
QGIRSFVQLWDDATPTTSPPRTEAPAPVTPTAPLTLPGPSSPPQENGTALWLGSGAPSSP
DTQRTEAGTPPVPTQLPPFPGRPSPPPPAAGRASPSSAPGGDPPWGSRQSPGRPQDPDSG
GLLRVAAGAGQQHRPPGIHRRTPPQLPLVTGPLGALAGRSARSSDPRTLVSQIPLSAVPG
DGGARAPHVANSVGPGLANRSALLGADPLTPTGQPVPAAAGRCLPLPPSLPVCSHLGIGR
AWLPNHLQHRSSEEVWAAARAWGHLLQTHCHRFLAWFFCLLLAPPCGAGPPPTPPPCRQF
CEALEDACWGHLDGSGLPVSCASLPAQEDGLCVFIGPGAESLGTEVGLLQLLGEPPPPQV
MQVDDPDIGPAFVFGPDANSGQVARYHFPSPFFRDFSLHFHVRPATEDAGVLFAITDAAQ
AVVSVGVRLSGVRDGHQHIQLLYTEPGATRTHTAASFRLPAFTGQWTRFALSVDGATVAL
FVDCELFQRVPLVRSLRGLELEPGAGLFVAQAGGADPDKFQGMIAELRVRGDPHVSPLHC
LEEDDEDSGGVSGDFGSGLEETQEPLREQSGPSPKPSLPEAPPVTSPPLAAGRDVEDSRT
EEIEEETTVSSLGARTLPGLDAVTIESVRSVGGGLEEGHAVQSPDARSIPGPQGPPGPPG
PPGKDGAPGRDGEPGDPGEDGRPGDPGPQGFPGTPGDAGPKGEKGDPGVGPRGPPGPQGP
PGPPGPSFRHDKLTFIDMEGSGFGGDLESLRGPRGFPGPPGPPGVPGLPGEPGRFGMNSS
DVPGPAGLPGVPGRDGPPGLPGTPGPPGPPGKDGGPGKMGQKGSPGEVGAPGPKGRQGDP
GPVGAPGENGLAGAPGPAGPPGPPGPPGPPGPGLAAGFDDMEGSGRPFWSTAQGASGSQG
PPGPPGVKGDPGITGPPGAKGEVGADGPPGFPGLPGREGSAGAQGPKGEKGTQGEKGDPG
RDGVGQPGLPGPPGPPGPVVYMSEQDRVLGGVPGPEGRPGFAGFPGPAGPKGDLGSKGQR
GLPGPKGEKGEPGPVFSPDGSLLAPAQKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGR
PGMNGLKGEKGEPGHSSIGFGMRGPPGPPGPPGPPGPPGTPIYDSNAFMESGHPGPPGLP
GLQGPSGPKGDKGDVGPPGPPGQFPFDLLQLGTEMKGEKGDRGDTGQKGERGEPGGGGFF
GSSVPGPPGPPGYPGIPGPKGESIRGQPGPPGPQGPPGIGHEGRQGPPGPPGPPGPPGPP
SFPGPYRQTISVPGPPGPPGPPGPPGTMGTSSGQVRIWATYQTMLDKVPEVPEGWLIFVA
EREELYVRVRNGLRKVLLEARTPLPRGTDNEVAALQPPVGNPYPRRELTHSTARPWRADD
ILANPPRLLDPQPYPGAPQHGSYLHFQPARPTGRPTHTHTHQDYHPVLHLVALNSPQPGG
MRGIRGADFQCFQQARAVGLAGTFRAFLSSRLQDLYSIVRRADRTSVPIVNLRDEVLFPS
WEALFSGSEGQLKPGARIFSFDGRDVLQHPAWPQKSVWHGSDPSGRRLTDSYCETWRTEA
AAATGQASSLLAGRLLAQKAASCHNAFIVLCIENSFMTSFSK
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atggctcggctccccggcagccgcctgggccccccgctgctgcttctcctggtcacatat
tgcctcgcggccgcccatgctgacctgctgagcctaaactggctgtggtccactaggacc
gacgggcccacagccgaactggtctctgagcccccggggagcccacatgggcagcccaga
gaggacaccagcacacacgcggccccccagcatggccccacggagcaggggagaggccct
gccagcccggagctccccgtggagaggccagagactggcctgggcggtgcctcccccgcg
ggcccggacacgaaggaggagaacatcgccggcgtgggagccaagatcctgaatgtggct
cagggcatccggagctttgtccagctgtgggatgacgccactcccaccacgagccccccc
cggacagaggcgccagcccctgtgacccccacggcccccctcaccctccccgggccctcc
agccccccccaggagaacgggaccgctctctggctgggcagtggggccccgagctctccg
gacacccagaggaccgaggccggcaccccaccagtgcccacccagctgccgcccttcccg
ggcaggccctcgccaccaccacctgctgcaggtagagcttctccgtcctctgcgccaggt
ggggaccctccctgggggagccggcagtccccggggcggccccaggatccggacagcgga
ggactcctgcgcgtggcagccggtgccggccagcagcaccgaccccctggcatccacaga
cgcacgcctcctcagctccccctggtgacgggccccctgggcgctctcgccggccgctcc
gctcgctcctccgacccccgcaccctggtgtctcagatcccgctctcggctgtccctggg
gacgggggcgctcgggctcctcacgtggctaactctgtggggcctggtcttgctaaccgc
tctgcactgctcggggcggacccgctgacccccaccgggcagcctgtccccgccgccgcc
ggccgctgcctgcccctgcctccctccctgcccgtctgcagccacctgggcattgggcgc
gcctggctgcccaaccacctgcagcacaggagcagcgaggaggtgtgggccgccgcccgg
gcgtgggggcacctcctccagacgcactgtcaccgcttcctcgcctggttcttctgcctg
ctgctggccccgccctgtggtgctggccctccgcccacgcctccgccctgccgccagttc
tgtgaggccctggaggacgcgtgctggggccacctggacgggagcgggctgccggtctcc
tgcgcctcgctcccggcccaggaggacggcctctgcgtgttcattgggccgggtgcagaa
agcctgggcacggaggtggggctcctgcagctgcttggagagcccccacccccgcaggtc
atgcaggtggacgaccccgacatcgggccagccttcgtctttggcccggatgccaacagc
ggccaggtggcccggtaccacttccccagcccgttcttccgtgacttctcgctgcacttc
cacgtccggcctgccaccgaggacgcgggggtgctgtttgccatcacggacgcggcccag
gcggtggtgtccgtgggcgtgaggctgtcgggcgtgcgtgatgggcaccagcacatccag
ctcctgtacaccgagcctggtgccacgcggacccacacggccgccagcttccgtctgcct
gccttcaccggccagtggacgcgcttcgccctcagcgtggacggcgcgaccgtggcgctg
tttgtggactgcgagttgttccagagggtgcccttggtgcgctccctgcggggcctggag
ctggagcctggcgccggcctcttcgtggcccaggccggaggagcagatcctgacaagttc
caggggatgatcgcggagctgagggtgcgcggggacccccacgtgagccccctgcactgt
ctggaggaggacgatgaggacagtggcggggtgtctggagacttcgggagcgggctggag
gagacccaggagcctctcagggagcagtcgggtccatcgcccaaacccagcctccccgag
gctcccccggtcacttctccgcccttggctgcaggcagggatgtggaagactccagaact
gaagaaattgaggaagaaaccacggtgtcttccttgggagctcggaccctccccggcttg
gatgcggtcaccatagagagtgttcggagcgttggcggcggcctggaagagggtcatgca
gtgcagagtcccgatgcacggtctatacccgggccgcagggcccccctggccccccaggg
cctccagggaaggatggtgcccccggaagggacggtgagccgggggatcccggtgaagat
gggagaccgggcgaccctgggccgcagggcttccccgggaccccgggagatgcgggcccc
aagggcgagaagggggaccctggggttgggccaagaggacccccaggaccccaagggcct
ccagggccaccaggaccctccttcagacatgacaagctgaccttcattgacatggagggg
tccgggttcggcggtgacctggagagcctccgaggccccagaggcttccccggccccccg
ggacccccaggcgtcccaggcctgcctggagagccaggccgctttgggatgaacagctca
gacgtcccaggacctgcaggccttcctggtgtgcctgggcgggacgggccccctgggctt
cctggcaccccgggtccgccgggtcctccaggaaaagacggaggaccagggaagatgggc
cagaaaggcagccctggtgaagtgggcgccccaggacctaagggaaggcagggtgaccct
gggcctgttggcgctcctggggagaatggcttggcaggagcccccggaccagctggccca
ccagggccccccgggccccccggaccaccaggaccaggacttgctgcggggtttgatgac
atggaaggctccgggagacccttctggtcgacggctcaaggagccagtgggtcgcaggga
ccgcccggcccgcccggggtcaagggggatcctggaataactggaccaccgggtgccaag
ggagaagtcggggccgacggacctcccgggttccccggcctccctggcagagagggctcg
gccggagcccagggacccaaaggagaaaaagggacccagggagagaaaggcgacccaggg
agggacggagtggggcagcctggcctccccggaccccccggacccccggggcctgtcgtc
tacatgtcggagcaggatagagtgctgggaggcgtgccgggacccgagggccggccgggg
ttcgcgggctttcctggaccagccgggccaaagggagatctgggctccaaaggccagagg
ggcctcccaggacccaagggtgagaagggtgagccgggcccggtgttcagccccgatggc
agcttgctggcccccgcccagaaaggggccaagggagagcctggcttccgaggacccccg
ggcccctacggacggccggggcacaagggagagattggcttccctgggcggccgggtcgc
cccgggatgaacggattaaagggggagaaaggggagccgggacacagcagcattggcttt
ggcatgagaggtccacccggtcccccagggcctccggggcccccaggccctcctgggact
cccatctatgacagcaacgcctttatggagtctggccaccctggacccccaggattacca
gggctccaggggccttctggacccaagggtgacaaaggagatgtgggccctccaggacca
ccagggcagttcccattcgacctcctccagctggggactgaaatgaagggggagaagggt
gaccgaggggacaccgggcagaagggtgaacggggtgagcccgggggtggcggattcttc
ggctcaagtgtgcccggcccccccggcccgccaggctaccctgggattccgggtcccaag
ggagagagcattcggggccagcctggcccacctggacctcagggaccccctggcatcggc
catgaggggcgtcagggacctcctgggccccctggaccccctggtcccccagggccccct
tcctttcctggcccttacaggcaaaccatcagtgttcccggccccccaggcccacctggg
ccccctgggccccctggaaccatgggcacctcctctgggcaggtgaggatctgggccacg
taccagaccatgctggacaaagtgccggaggtgccggagggctggctcatcttcgtggct
gagagggaggagctgtatgtccgggtccgcaacgggctccggaaggtcctgctggaggca
cggacgccgctcccacgcgggacggacaacgaggtggccgccttgcagccccccgtgggc
aacccgtacccccggcgggagctcacccactccacggcgcggccctggcgggcagatgac
atcctggccaaccccccacgtctgctggacccccagccctaccctggagccccacagcac
ggctcctacctgcacttccagccggctcgccccactggcaggcccacccacacccacacc
caccaggactaccaccctgtgctgcacctggtggcactgaacagcccccagccgggcggc
atgcgaggcatccgcggggcggacttccagtgcttccagcaggcccgcgccgtggggctg
gccggcaccttccgcgccttcctgtcctctcggctgcaggacctctacagcatcgtgcgc
cgggccgaccgcacaagcgtgcccatcgttaacctcagggacgaggtgctgttccccagc
tgggaggccttattctcgggctccgagggccagctgaagcccggggcccgcatcttctct
ttcgacggcagagatgtcctgcagcaccccgcctggccccagaagagcgtgtggcacggc
tcagaccccagtgggcgccggctgacagacagctactgcgagacgtggcggacggaggct
gcggcagccacgggccaggcgtcctcgctgctggccggccggctgctggcgcagaaagcc
gcgagctgccacaacgccttcattgtgctctgcatcgagaacagcttcatgacctccttc
tccaagtag
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integrated database retrieval system
