Mirounga angustirostris (Northern elephant seal): 123863296
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Entry
123863296 CDS
T11530
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano04360
Axon guidance
mano04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123863296 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
123863296 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mano04515
]
123863296 (ROBO1)
Cell adhesion molecules [BR:
mano04515
]
Immunoglobulin superfamily
ROBO family
123863296 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
DUF7908
Ig_J_second
Big_4
Motif
Other DBs
NCBI-GeneID:
123863296
NCBI-ProteinID:
XP_064436241
LinkDB
All DBs
Position
Unknown
AA seq
1654 aa
AA seq
DB search
MKWKHVPFLVIISLLSFSKDHLFQAQVIADPEDLERGNDNGTPIPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVGSEPPHFVVKP
RDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSTSRFSVSQTGDLTITN
VQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPIIRQGPGNQTVAVDGTVVLSCV
ATGSPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAKLGDTGRYTCIASTPSGEATWS
AYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIE
AFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDV
PPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGAN
HGESEWLVFEVRTPAKNSVVIPDLRKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSA
PPQSVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSV
VIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQP
AFIAGIGASCWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVS
SGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTAGNGNSDGNLTTYSRPADCIA
NYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQ
LIQSNLSNNMNNGSGDSSEKHWKPPAQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIP
YNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHS
NSEEYSISVDESYDQEMPCPMPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSH
QSTATLTPSPQEELQPMLQDCPEETGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGP
LVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSA
SEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDASGRRHFHASQC
PRPTSPVSTDSNMSAAQIQKARPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQS
KAQLEVRPVIVPKLPSIEARTDRSSDRKVGSYKGREVLDGRQVADMRTNLGDTREVQEQQ
NDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQR
EQANVGRRNIAEMQVLGGYERGEDNNEELEETES
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacatgttccttttttggtcataatatcactcctcagcttttccaaagat
cacctgttccaggcccaggttattgcagaccctgaagacctagagagggggaacgacaac
gggacgccaatccccacctctgataatgatgacaattcgctgggctacacaggctcccgt
cttcgtcaggaagattttccacctcgcattgttgaacacccttccgacctaattgtgtca
aaaggagaacctgccactttgaactgtaaagccgaaggccgccccacacccactatcgaa
tggtacaaagggggggagagagtggagacagacaaagatgaccctcgctcacaccgaatg
ttgctgccaagtggatctttatttttcttacgtatagtacatggacgaaaaagtaggcct
gatgaaggggtctacgtctgtgtagcaaggaattacctcggagaggccgtgagccataac
gcatcgctggaggtggcaatcctacgggatgacttcagacaaaatccttctgatgtcatg
gtggccgtgggggagcctgctgtgatggaatgccaacctccacgaggccatcccgaaccc
accatttcctggaagaaagatggctctccactggatgacaaagatgaaagaataactata
cgaggcggaaagctcatgattacttacacccgcaaaagtgatgctggcaaatatgtttgt
gttggtaccaacatggttggggaacgtgagagtgaagtagcggagctaactgttttggag
agaccatcgtttgtgaagagacctagtaacttggctgtgactgtggacgacagtgcagaa
ttcaaatgtgaggcccgaggcgaccctgtgcctacggtacgatggagaaaagacgatggg
gaactgcccaaatccagatatgaaatcagagatgatcataccctgaagattcggaaagtg
atggctggtgacatggggtcatacacttgtgtggcagaaaatatggttggaaaggctgaa
gcatcagctactctgactgtccaagttgggtctgaacctccacactttgttgtgaaaccc
cgtgaccaggttgttgccttgggacgaactgtaacgttccagtgtgaagcaaccggaaat
cctcaaccagctattttttggagaagagaggggagtcagaatctgcttttctcatatcag
ccacctcagtcaaccagccgcttttcggtctcccagactggtgatctcactatcactaac
gtccaacgatctgatgtcggttattatatctgccagactttaaatgttgctggaagtatc
atcacaaaagcatatttggaagttactgatgtgattgcagaccggcctccccccatcatt
cggcaaggtcctgggaatcagactgtggcagtggatggtaccgtagtgctcagctgtgtg
gccacaggcagtccggtgcccacgattctgtggagaaaggatggagtccttgtgtcaacc
caagattctcgaatcaagcagctggagacgggagtgctacagatccgatacgctaagctg
ggtgacacaggtcggtacacctgcattgcatcgacccccagtggtgaagcaacatggagt
gcttacattgaagtccaagaatttggagttccagttcagcctccgagacccactgaccca
aatttaatccctagtgccccctcaaaacccgaagttacagatgtcagcagaaacacagta
acattgtcatggcaaccaaatttgaattcgggtgcaactccaacatcttatattatagaa
gccttcagccatgcatctggtagcagttggcagaccgtagccgagaacgtgaaaacagaa
acatttgccattaaaggactcaaacctaatgcaatttaccttttccttgtgagggcagca
aatgcgtatggaattagtgatccgagccagatatcagacccagtgaaaacgcaagatgtt
cccccaacgagtcagggagtagatcacaagcaggtccagagagagctgggaaatgttgta
ctgcacctccacaaccctaccatcctttcttcttcttcagtcgaagtgcactggacagtg
gaccaacagtctcagtatattcaaggatataaaattctttatcggccatctggagccaac
catggtgaatcggagtggttagtttttgaagtgaggaccccagccaaaaatagcgtggtt
atccctgatctcagaaagggggtcaactatgaaattaaggctcgtcctttttttaatgaa
tttcaaggagcagatagtgaaattaaatttgccaaaaccttagaagaagcacccagtgcc
ccaccccaaagtgtaactgtatcaaagaatgatggaaatggaactgcaattcttgttagt
tggcagccgcctccagaagacactcaaaatggaatggtccaagagtataaggtttggtgt
ctgggcaatgaaactcgctatcatataaacaagacggtggatggctccaccttttctgtg
gtcattccttctctggttcctgggatccgatacagtgtagaggtggccgccagcactggg
gccggggctggggtgaagagtgaaccacagttcatccagttagattctcatggaaacccc
gtgtcacctgaagaccaagtcagccttgctcagcagatctccgacgttgtgaagcagcca
gcattcattgcaggaatcggggcatcctgttggatcatcctcatggtctttagcatctgg
ctgtatcgacaccggaaaaagagaaatggactgaccagtacttacgcgggtatcagaaaa
gtcccgtcttttaccttcacaccaacagtaacttatcagagaggaggtgaagctgtgagc
agtggagggaggccaggacttctgaacatcagcgaacctgccacgcagccgtggctggca
gacacgtggcccaatactggcaacaatcacaatgactgctccatcaattgctgcacggca
ggcaatggtaacagtgatggcaacctgaccacctacagtcgcccagctgattgtatagcc
aattataacaaccaactggataacaaacaaacaaatctgatgctccctgagtcaactgtt
tatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttcaatagcccaaat
ctgaaggatgggcgttttgtcaatccatcagggcagcccactccttacgccaccacccag
ctcatccagtcaaacctcagcaacaacatgaacaatggcagtggggactccagcgagaag
cactggaaaccgcctgcacagcagaaacaggaagtggcccccattcagtataacatcatg
gagcaaaacaaactgaacaaagattatcgagcaaatgacacaattcctccaactatccca
tacaaccaatcatacgaccagaatacaggaggatcctacaacagctcagaccgaggcagt
agtacatctgggagtcaagggcacaagaaaggggcacggacacccaaagtaccaaaacag
ggtggcatgaactgggcagacctgcttcctcccccgccagcacatcctccacctcacagc
aatagtgaagagtacagtatttccgtagacgaaagctatgaccaagaaatgccgtgtccc
atgccaccagcaagaatgtatttacaacaggatgaactagaagaggaggaagatgagcga
ggccccactccccctgtgcggggagcagcttcttctccagctgcggtgtcttatagccat
cagtccactgccactctgaccccctccccacaagaagaactccagcccatgttgcaggac
tgcccggaggagactggccacatgcagcaccaacccgataggagacggcagccggtgagc
ccccctccaccaccacgaccgatttccccaccacatacctacggatacatttcaggacct
cttgtctcagatatggatacagatgcgccagaagaggaagaagatgaagcggacatggaa
gtcgccaagatgcagaccagacggcttttgttacgtggccttgagcagacccctgcctcc
agtgtgggggaccttgagagctctgtcactgggtccatgatcaatggctggggctcagcc
tcagaggaggacaacatttccagtggacgttccagcgtgagttcttctgatggctccttc
ttcaccgatgctgattttgcccaggcagtggcagcagctgcggagtatgctggtctgaaa
gttgcacgtcgtcaaatgcaggatgcttctggccgccgccattttcatgcgtcccagtgc
cctcgacccacaagtcctgtttctacagacagcaacatgagtgctgctcaaatacagaag
gccagaccagccaagaagcaaaaacaccagccaggacatctgcgcagagaagcctacaca
gatgatcttccacctcctccagtgccaccacctgctataaagtcacccactgtccagtcc
aaggcacagctggaggtgcgacctgtaatcgtgccaaaactcccttctatagaagcaaga
acagacagatcatcagatagaaaagtaggcagttacaaggggagagaagtattggatgga
agacaagttgctgatatgagaaccaatctgggtgataccagagaagtacaggaacagcaa
aatgatggcaaaggacgaggaaataaggcagcaaaacgagaccttccaccagcaaagact
cacctcatccaagaggatattctaccttactgtagacctacttttcctacatccaataat
cccagagatcctagttcttcaagctcaatgtcatcaagaggatcaggaagcagacaaaga
gaacaagcaaatgtaggtcgaagaaatattgcagaaatgcaagttcttggaggatatgaa
aggggagaagataataatgaagaattagaggaaactgaaagctga
DBGET
integrated database retrieval system
