Mirounga angustirostris (Northern elephant seal): 135365356
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Entry
135365356 CDS
T11530
Symbol
PCDHAC1
Name
(RefSeq) protocadherin alpha-C1
KO
K16493
protocadherin alpha
Organism
mano Mirounga angustirostris (Northern elephant seal)
Pathway
mano04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mano00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135365356 (PCDHAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mano03036
]
135365356 (PCDHAC1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mano04515
]
135365356 (PCDHAC1)
Chromosome and associated proteins [BR:
mano03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
135365356 (PCDHAC1)
Cell adhesion molecules [BR:
mano04515
]
Cadherins
Protocadherins
135365356 (PCDHAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Ig_CLSTN
DUF5527
Motif
Other DBs
NCBI-GeneID:
135365356
NCBI-ProteinID:
XP_064452073
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MAGWKVAVLCLWVSCGSAAGQLEYSVLEETERGVAVGNVSADLGLSAAALSLRNFRFLSG
HREPYFGVDRASGGLVVLEPADRERLCETKAVCVLTYELVLEDPLELHPMRVHVVDTNDS
SPFFPAGDVQLHIPEFLMPGARFTLPNAQDADEGSNGVLSYSLSPSQHFRLIMGSQVDGS
EYPELVLAKALDREQRATHQLVLSARDGGRPARSGDARVTIIVVDTNDSAPVFERPVYRA
KVPETAPNGTVLLRVQASDPDEGSNGEIRYSLSNSTRAALRHHFHVHPRTGEVRVAASLG
PPETLLEAYIEARDEGTFGLANTVKLLVEVTDVNDHAPEVNLLTLSSSVSEDAAPGTVIA
LLSLRDEDLGPNGKVVCSMSSGGPFKLKASFDNYYSLLTDGPLDREQVGEYQVLITASDG
GSSPLSTLKTLTVSVADVNDNSPSFAQPQQELFVAENNGPGASLGCVFAQDPDLGKNGLV
FYELLDIISERQTASSLVAVESSSGAITAKTSFDFEQLRGFHFQVEARDGGIPPRSATVT
VNLFVVDRNDNAPVILVPVSRNGSIPVEIAPRSARSGHLVTKVVAEDADSGSNAWLSYHI
SQASDSSLFRISASMGELRTARLILPSDAVKQRVVVVVRDQGDPSLSSSVTLGVLLSNSA
PQVLPDFEDTWETGGHLSTQNLYLVIALACISFLFLGWLLFFLCIKVNQSPVCCSQRCCR
SPEELRYARKMASSPCMLSATVDVTTVERLSQTYLYQASLGLGSDNNSLLLRGEYSTADL
RNLATGVGLNLPVSCIHIRNRKGDHINVNAMVSKFLEI
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctggaaggtggcggttttatgtctgtgggtctcctgcggctctgccgccgga
cagctggaatactcagtgttggaggagaccgagcggggcgtagccgtaggcaatgtgtcc
gcggacttggggctgtcagcggccgctctgtccttgaggaactttcgcttcctttccggc
caccgcgagccctacttcggggtggatcgggccagcggcggcttggtggtcctagagccg
gcggaccgcgaacggctgtgcgagaccaaagctgtctgcgtcttgacctatgagctggtg
ctcgaggacccgctggagctacacccgatgcgagttcacgtcgtggacaccaacgacagc
tcgcctttcttccctgccggcgacgtgcagctgcacatccccgagttcctgatgccggga
gcccgctttactctccctaatgcccaagatgctgacgagggaagcaacggggtcctaagc
tacagtctgagccccagccagcactttcgcctgatcatgggatcgcaggtggacggcagt
gaatacccggagttggtattagcgaaagcgctggatcgggagcagcgcgccacccaccag
ctggtgctcagcgctagggacggcgggcggcccgcgcgctccggagacgcacgagttacc
atcatagtggtggacacaaacgacagtgcgccggtatttgagcgcccagtgtaccgcgcc
aaggtaccagagactgcaccgaacgggactgtgttactacgagttcaggcctcggacccg
gatgaaggctccaatggggaaatccggtactccttaagcaacagcacgcgagcagcgctg
cgacaccactttcacgtgcaccctagaactggggaggtgcgggtagctgcgtcactaggt
ccaccggaaacgttgttggaggcgtacattgaggcgagggatgagggcaccttcggttta
gctaatactgtcaaactgctggtggaagtgacggatgtgaatgatcatgcccccgaggtg
aatctcctgactctgtccagttcagtttctgaggacgctgcccctggcacagtgattgcc
ctcctcagtctcagggatgaggatctcggtcccaacggtaaggtcgtttgtagcatgtcc
agtggaggcccttttaagctgaaggcttcctttgacaactactacagcttgctgactgat
gggccgctggaccgggagcaggtcggcgaataccaggtcctgatcactgcctcagatggt
ggctcatcccccttgagcaccctcaagacactgactgtgtctgttgctgatgtgaatgac
aattcaccaagctttgctcaaccacaacaggaactttttgtggctgaaaacaatggtcct
ggggcctctctaggctgtgtgtttgcccaggatcccgacctggggaagaatggccttgtc
ttctatgagctgttggatattatctctgaaaggcagacggcctctagcttggtggcagta
gaatcatccagcggggctatcactgccaaaacgtcctttgactttgagcagctcaggggg
tttcacttccaagtggaagcccgggatggtggcattcctcccaggagtgcaacagtgact
gtgaacttgtttgtggtagataggaatgataatgctccagtcatcttggttcccgtgtcc
agaaatggctccattccagtggagattgcgccccgctctgccagaagtggacacttggtc
acaaaagtggtagcagaggatgcagacagtggctctaatgcttggctttcctaccatatt
tctcaggcttctgactccagccttttcagaatttcagccagtatgggagagctccgaact
gcccgattaattcttcccagtgatgcggttaaacagagggtggtggtcgtggttcgggac
cagggagacccatcactttcctcttctgtcacattgggtgtactgttgagcaactcggcc
cctcaggtccttccagactttgaggatacctgggaaacaggaggccacctttctacccag
aacctgtacttagtaattgctctggcctgtatttcctttttatttctggggtggttactt
ttctttttgtgcatcaaggtgaaccagagcccagtttgttgttctcaaaggtgctgtcgc
tccccagaggaactgaggtatgcgaggaagatggcttcgagtccttgcatgttatcagcc
acagtagacgtcactaccgttgagagactttctcagacctatctctatcaggcctctcta
ggacttggttctgataataacagtttgctgttgcgtggggaatacagtactgctgacctg
agaaatctggctacaggggtaggattgaatttgccagtatcctgcattcatattcggaat
aggaaaggggatcacataaatgtcaatgccatggtaagcaaatttttggagatttga
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