Marinobacter sp. NP-4(2019): EHN06_00150
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Entry
EHN06_00150 CDS
T09527
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
manp
Marinobacter sp. NP-4(2019)
Pathway
manp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EHN06_00150 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manp03400
]
EHN06_00150 (recB)
Enzymes [BR:
manp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EHN06_00150 (recB)
DNA repair and recombination proteins [BR:
manp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EHN06_00150 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_25
UBA_HOIP
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AZT82088
UniProt:
A0A3T0CNU2
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All DBs
Position
complement(34623..38345)
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AA seq
1240 aa
AA seq
DB search
MSNNMTNRNPNLDPLTLPLNGSTLIEASAGTGKTFTIAILYVRLVLGHDQPEDSPLAQGI
LPPNLLVVTFTDAATKELRDRIRTRLTQAAEVFSDAADVAAPSAETALIHQLRDDSYPDP
ATWPECRKKLLLAAEWMDEAAVSTIHGWCNRMLSEHAFDSGSLFKLTLETDQSDLLDEVV
RDYWRTFIYPLSSVLMDEALSHWKTPDDLRKSVRNLITDADNLDAPTGDVKQAIEQTVSQ
RQQRARELKAYDWANWKPEVVELLTTLNKSKRLHGGSMKPMIAAWDTLLEWAASDELYPQ
GLDKAGFQNQTPAILPSKLKGEEPAPHHPAFEAIAELVAFSQNLPSAESDILRHASHWIA
QRLESEKQKRSEMGFDDLLTRLDDALHGPRGEQLAATIRRQFPVALIDEFQDTDPVQYRI
FNRVYQVADNDPHTCMLMIGDPKQAIYGFRGADIHTYLEARKGARERTYTLGRNFRSAEA
MVKAVNRVFEHGDQNSRDGAFLFGKGDTSPLPFQGVDANGTRRLWSVQGEIQPSLTFWSL
ESDEEDKTGNRKGLAKGAATSDIAETCASEIARLLSLGQAGQAGFALAGNPSDLEPVQPK
DIAILVNNRNEASAVRDALGRRQIKSVYLSDRDSVLTSPEAKEMLCWLKAFAEPRQLAYA
RASLATPTLGQSWQSLNRLLTDEIALEREIERFMGYQQQWQQQGVLPMLRSFLMDFEVPG
RLLQRPDGERRLTDILHIAELLQQDSLQLDGEHALVHHYTQILRAADEEDEHRTLRLESD
AGLVKVITVHKSKGLEYPLVFLPFGTAFRAENEKQAFVRYHDDSGQLTTVFDPTPDDVAR
ADRERLGEDIRKLYVALTRARFATWVGVAAIDNWPLSGLGYLIGGEGEPHSVSNCLNQLA
NGHPAISVMPLPETTDNHYTEAAPEALGPALISTREAREEWWIASYSSIEYTGMAGTGIV
FSGEVEDAETQNLLEESAQDEVEETVVPATRNHHHFPKGAGPGTFLHELLEWCTQQGFQQ
VVDNPAQLREQLTRRCSTRGWSEWIEPLEQWLLALIRQPFPLSRTGHQTTSLAELTTLRP
ELEFWFESCHVSTRAMDQLITHHTLNGADRPQVNDRSFNGMLKGFIDLVFEHDGQYYVLD
YKSNTLGDNDLAYTDQAMGEAILEKRYDLQYILYLLALHRLLKARLPDYDYDTHIGGAVY
LFLRGVNAPTAGAFTDKPPRTLIEQLDAMFDGNTPGEVAA
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaacatgaccaatcgcaatcccaatctggatcccttgacgctgcccctgaac
ggcagcaccctgattgaagccagtgctggtactggcaagaccttcaccatcgctattctg
tatgtgcgcctggtactgggccacgatcagccggaggacagtccgctggcacaggggatc
ctgccgccaaacctgcttgtggtgacctttaccgacgctgccaccaaggaactgcgggac
cgtatccgcacccggctgacccaggccgccgaggtgttttcagacgccgcggacgtcgca
gcgccatcagcggaaaccgcgctgatccatcagcttcgcgatgacagttacccggacccg
gccacctggccggaatgccgcaagaagctgttgctggccgccgagtggatggacgaagcc
gccgtctccacaatccacggctggtgcaatcgcatgctcagcgaacacgccttcgacagc
ggcagcctgttcaagctcaccctggagaccgaccagagcgacctgctggacgaagtcgtc
cgcgactactggcgcaccttcatctaccccttgtcctcggtgttgatggacgaagccctc
agccactggaaaaccccggatgacctgcgcaaatcggtgcgcaacctgatcaccgacgcg
gacaacctggacgcacccaccggcgatgtgaaacaggccatcgaacagaccgtcagccaa
cgccagcaacgggcccgggaactgaaggcctatgactgggccaactggaaacccgaggtg
gtggagctgctgacaacgctcaacaagagcaaacggctccacggcggcagcatgaagcca
atgattgctgcctgggataccctgctggagtgggcggcttcggacgaactctatccccag
ggtctggacaaggccggattccagaaccagacaccggccattctgcccagcaagctcaag
ggcgaggagccggcgccacaccatcccgcgttcgaggccattgccgaactggtggccttc
agccagaacctgcccagtgccgagtcggatattctcagacacgccagccactggattgcc
caacggctcgaatcggaaaaacagaaacgctcggagatgggcttcgacgaccttctgacc
cgcctcgacgacgccttgcacggcccccgtggcgagcaactggcggccaccatccgccgc
cagttcccggtggcgctgatcgacgaattccaggacaccgacccggtgcagtaccgcatc
ttcaatcgtgtctaccaagtggcggacaacgatccgcacacctgcatgctgatgatcggt
gacccgaaacaggccatctatgggttccgcggcgcggacatccatacctacctggaagcc
cgcaagggtgcccgggagcgtacttacaccctgggccgcaacttccgttccgccgaagcc
atggtgaaagcggtcaaccgggtgttcgagcatggcgaccagaacagccgtgacggtgcc
ttcctgttcggcaagggtgatacctcgccactgccgttccagggcgtggacgctaacggt
accagacgcctgtggtcggtccagggcgaaatccagccgagtctcaccttctggtcgctg
gaatcggacgaagaggacaagaccggaaaccgcaagggactggccaaaggggcagcgacc
tccgatatcgcggaaacctgtgccagtgaaattgcccgattgctgagtctggggcaggcg
ggccaggctggattcgcactggcgggaaacccgtcggacctcgaaccggtacaacccaaa
gacatcgccattctggttaacaaccgcaacgaggccagtgctgtgcgggacgccctcgga
cgacgccagatcaagagtgtgtacctgtccgaccgggattcggtcctgacctccccggaa
gcaaaagagatgctgtgctggctcaaggccttcgccgaaccccggcaactggcctacgcc
cgggcctcgctggccaccccgacgctgggccagtcctggcagagcctcaaccggctactg
accgacgaaattgccctggagcgggaaatcgaacgctttatgggttaccagcagcaatgg
cagcagcagggtgtgctgcccatgctgcgcagcttcctgatggatttcgaggtgcctggc
cggttgctccaacggcctgatggcgagcgccggctgaccgacatcctgcacatcgccgag
ctgctgcagcaggacagcctgcaactggatggggaacacgctctggtgcaccactacacc
cagatcctgcgggcggcggacgaggaagacgaacatcgcaccctgcgcctggaaagcgac
gccgggctggtaaaggtgatcaccgtgcacaaatccaagggtctggaatacccgttggtt
ttcctgcccttcggcacagcatttcgtgccgagaacgagaaacaggcctttgtccgttat
cacgatgacagcggccagctcaccaccgtgttcgaccccaccccggacgacgtggcacgg
gccgaccgggaacgactgggtgaagacatccgcaaactctacgtggcgctgacccgcgcc
cgttttgccacctgggtcggcgtagcagcgatcgacaactggcccctcagcggcctgggc
tatctgataggcggggagggtgaaccacactccgtcagcaactgcctgaaccaattggcg
aacggccacccggcgatatcggtcatgccgttgccggagaccaccgacaaccactacacc
gaagccgcaccggaagccctgggacctgcgctgatttccacccgcgaagcgagggaggag
tggtggatcgccagttactcctccatcgagtacacaggtatggccggaaccggcatcgta
ttcagcggggaagtggaggacgcagaaacccagaaccttctggaagaaagcgcccaggac
gaggtcgaagaaaccgtcgttccggcgacccgcaaccaccaccatttccccaaaggtgcc
ggcccgggcaccttcctgcacgaattgctggagtggtgtacccagcagggattccaacag
gttgtggataacccggcgcaactgcgggaacagctcactcgccgatgcagcacccgtggc
tggagcgagtggatagagcccttggagcagtggctgctggcgctgatccgccaaccgttt
cccctgagcagaaccggccatcagaccaccagcctggcggaactgacgacgctgcgcccg
gaactggagttctggttcgagagttgccatgtcagtacccgggccatggaccagttgatc
actcaccataccctcaacggcgccgaccggccccaggtgaacgaccgcagcttcaacggc
atgctcaagggttttatcgacctggtgtttgaacacgacgggcagtattacgtgctggac
tataagtccaatacactcggcgacaacgaccttgcctataccgaccaggccatgggtgag
gcgatcctggagaagcgctacgacctgcagtacatcctttacctgctggccctgcaccgg
ttgctgaaggcccggctgccggattatgactacgatacccacatcgggggtgccgtgtac
ctgttcctgcgaggggtgaatgcccccaccgccggcgccttcaccgacaaaccgccaagg
acactgatcgagcaactggatgcgatgtttgacggcaacacgccaggggaggtcgctgca
tga
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