Marinobacter sp. NP-4(2019): EHN06_00170
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Entry
EHN06_00170 CDS
T09527
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
manp
Marinobacter sp. NP-4(2019)
Pathway
manp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EHN06_00170
09124 Replication and repair
03420 Nucleotide excision repair
EHN06_00170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
manp03021
]
EHN06_00170
03036 Chromosome and associated proteins [BR:
manp03036
]
EHN06_00170
03400 DNA repair and recombination proteins [BR:
manp03400
]
EHN06_00170
Enzymes [BR:
manp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EHN06_00170
Transcription machinery [BR:
manp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EHN06_00170
Chromosome and associated proteins [BR:
manp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EHN06_00170
DNA repair and recombination proteins [BR:
manp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EHN06_00170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
DUF3799
Motif
Other DBs
NCBI-ProteinID:
AZT82092
UniProt:
A0A3Q9NGT2
LinkDB
All DBs
Position
44488..46782
Genome browser
AA seq
764 aa
AA seq
DB search
MKVAIRTLCEFAARRGDLDFRYTPAPSAEEGIAGHQSIQSRRGYGYKSEYLLTGECLGLE
LSGRADVYNPHRGRLEEIKTHRGDLSRIREHQRALHRAQLRAYGALLCRQENRKTLELAL
IYYDTGKDKETPVMETATADELWQELEGLCRQYKAWAEQEAHHREQRDALLSELTFPFAE
FRPRQRQLAETVYKNSVKSGTLLLEAPTGLGKTLGTLFPALMAMPAASQDRLYYLTCRNT
ARQLAMDAVEKLRSARNEHQPWPLRTLELVSKDDACEHPDKACHGDSCPLAKGFFDRLPD
ARAEAAQTEDTLDQAILAKIAAGHGICPYFLAKEMARWCDVVIGDVNRLFDQSALLHGLI
RQNNWKASVLVDEAHNLVDRGRGMYSVRLEQQRLLKVKKTAPRPLKSAIDRTARAWQSLI
RDHQTDDETPVFFETLSSQLLGALQAMVSNLTDYLADNPPDLALQELLFESVAFMKLADS
FGDHSLCEFQRTGRGRASITIQNLIPADFLRERFEAAQSVLLFSATLSPGVYYRDLLGLP
EDTRFTSLPSPFSTDQLQVHFTPGISTRQTHRDASLRPIADLIARQFRERPGHYLAFFSS
FKYARAVSETLAKGAPDIPQRAQQPGMSPQQRAEFLAGFREKTGSVAFAVLGGVFSEGID
LPGDQLIGAFVATLGLPPFDAWHEILKIRLQQRFGAGYQYTYLIPGLQKVAQAAGRVIRT
PEDRGVIWLIDDRFLQPAINPLLPRWWFVDPSRLGSTVEASGSG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagccatccgcaccctctgtgaattcgccgcccgtcgtggcgatctggacttt
cgctatactccggcgcccagtgccgaggagggcatcgccggccaccagtcaatacaatcc
cgccgtggttacggttataaaagcgagtacttactgactggtgagtgcttggggttggag
ctttccggtcgagctgatgtatacaatccccatcgtggtcggctggaggaaatcaagact
caccggggcgatctgtcgcgaatccgtgaacaccagcgcgcgctccaccgagcccagctc
agagcctacggtgccctgctatgccgccaggaaaaccgcaaaacactggaactggcgctg
atctattacgacaccggcaaggacaaggaaacgccggtgatggaaaccgccaccgccgat
gaactctggcaggagctcgaaggcctgtgccggcagtacaaggcatgggccgagcaggaa
gcgcatcatcgggagcagcgggacgccctgctgtctgaattgacctttccctttgccgaa
ttcaggccgcggcaacgccagttggcggaaacggtgtacaagaattcggtgaagtccggc
actttgttactggaggctcccaccggtctcggcaagacccttggcaccctgttccctgcc
ctgatggccatgccggcggccagccaggacaggctgtactacctcacctgtcgcaatacg
gcccggcagttggccatggatgcggtggagaaactccgttccgcccggaatgagcaccag
ccttggccgctgagaactctggaactggtgtcgaaagacgatgcctgtgagcacccggac
aaggcctgccatggcgattcctgcccgttggccaaaggctttttcgatcgcctgccggat
gcccgggccgaggctgcacagactgaagacacgcttgatcaggcaatattggcgaagatc
gccgcaggtcacggcatttgcccctattttctcgccaaggagatggcgcgctggtgtgat
gtggtgattggcgatgtgaaccggctgtttgaccagtccgccctgctccacggtctgatt
cgccagaacaactggaaggccagcgtactggtggatgaagcccacaatctcgtggaccgg
ggccggggcatgtattccgtgcggctggaacagcaacgactgctgaaggtgaaaaagacc
gcccccaggccgctgaaatcggcaatcgatcgcaccgcccgggcctggcagagtctgatc
cgggatcatcagacggacgacgagaccccggtattctttgaaaccctgtcctcccagcta
ctcggggccttgcaggccatggtctcgaacctcaccgattatctggcggacaacccgccg
gacctcgccttgcaggaactgctgtttgaaagtgtggccttcatgaagctggcggactcc
tttggtgatcactccctgtgcgaattccagcgcaccggtcggggccgggccagtatcacc
atccagaacctgataccggcggattttctgcgggagcggttcgaggcggcacagtcggtc
ctgttgttctccgccaccttgagccctggcgtttactaccgggatctgctgggcttgccg
gaggacacccgcttcacctccctgccgagtccgttcagtacggaccagttacaggtgcac
ttcacgccgggcatcagcacccgccagacccatcgggatgcctccctgcggccgatagcg
gatctcatcgcccgacaattccgcgaacgacctggtcactacctggcgtttttcagcagc
ttcaagtacgcacgggcggtcagtgagaccctggccaaaggggcaccggacattccccag
cgtgcccagcagcccggcatgagtccacagcagcgggcggagtttctggcgggttttcgg
gagaagacgggcagtgtggcgtttgcagtcctgggtggggtgttcagtgagggcatcgac
ctgcccggggaccaactaattggtgcctttgtggccactctgggtttgccgccgttcgat
gcctggcatgagattctaaaaatccgcttgcagcagcgtttcggtgctggttaccaatac
acctaccttatccccggtctgcagaaggtggcccaggctgccggacgggtgattcgtact
ccggaggaccggggggtgatctggctgatcgatgaccgttttttgcagccggcgatcaac
ccgttgttgccccgctggtggtttgttgatccgtcgcgcctcgggtcgacggtcgaagct
tcagggtccggttga
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