Marinobacter sp. NP-4(2019): EHN06_04480
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Entry
EHN06_04480 CDS
T09527
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
manp
Marinobacter sp. NP-4(2019)
Pathway
manp00260
Glycine, serine and threonine metabolism
manp00460
Cyanoamino acid metabolism
manp00630
Glyoxylate and dicarboxylate metabolism
manp00670
One carbon pool by folate
manp00680
Methane metabolism
manp01100
Metabolic pathways
manp01110
Biosynthesis of secondary metabolites
manp01120
Microbial metabolism in diverse environments
manp01200
Carbon metabolism
manp01230
Biosynthesis of amino acids
manp01240
Biosynthesis of cofactors
manp04981
Folate transport and metabolism
Module
manp_M00140
C1-unit interconversion, prokaryotes
manp_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EHN06_04480
09102 Energy metabolism
00680 Methane metabolism
EHN06_04480
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EHN06_04480
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EHN06_04480
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EHN06_04480
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EHN06_04480
Enzymes [BR:
manp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EHN06_04480
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AZT82857
UniProt:
A0A3Q9NKH5
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Position
997379..998635
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AA seq
418 aa
AA seq
DB search
MFNRDMKIAGFDDELWNAMQAEEKRQEAHIELIASENYTSPRVMEAQGSVLTNKYAEGYP
GKRYYGGCEFVDIAEDLAINRAKELFGAAYANVQPHSGSQANSAVFMALLKPGDTVLGMS
LAHGGHLTHGASVNFSGKIYNAVQYGINNDTGLIDYDEVEALAVEHKPKMIIAGFSAYSQ
ELDFARFREIADKVGAYLFVDMAHVAGLVAAGVYPDPVPHAHVVATTTHKTLRGPRGGLI
LACDDADLQKKLNSAVFPGGQGGPLMHVIAAKAVCFKEAMSDDFKAYQQQVVTNASAMAQ
VFIERGYDVVSGGTKNHLFLVSLIKQDITGKDADAALGRAHITVNKNAVPNDPRSPFVTS
GLRIGTPAVTTRGFGETECRDLAGWMCDILDNLEDDAVNNRVREQVEAVCARFPVYAG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcgtgatatgaaaatcgccggctttgacgacgaactctggaacgccatgcag
gcggaggaaaagcgtcaggaggctcacatcgagctgattgcgtcggaaaactacaccagc
ccgcgggtgatggaagcccagggcagcgtgctcaccaacaagtacgccgagggctatccc
ggtaagcgctattacggtggctgtgagtttgtcgatattgccgaagatctggcgatcaat
cgagccaaggaactgttcggtgctgcctacgctaatgtgcagccacattccggctcccag
gccaactcggccgtgttcatggccctgctgaagcccggtgatactgttcttggtatgagc
ctggcccacggtggtcatctgacccacggtgccagcgtcaacttctccggcaagatctac
aatgccgtccagtatggtatcaacaacgatactggcctgatcgactacgatgaggttgaa
gccctggcggtcgagcacaagccgaagatgatcatcgccggcttctctgcctattcccag
gagctggattttgcccgcttccgcgaaattgcggacaaggtgggtgcctacctgtttgta
gacatggctcacgttgccggtctggtggctgctggcgtctacccggacccggttccccac
gcccatgtggttgcaaccaccacccacaagaccctgcgtggtccacgcggtggcctgatc
ctcgcctgtgacgatgcggacctgcagaagaaactgaactccgcagtgtttccaggcggt
cagggcggcccgctgatgcacgtgatcgctgccaaggctgtgtgcttcaaagaagccatg
agcgatgacttcaaggcatatcagcaacaggttgtgacgaacgcatcggccatggcgcag
gtatttattgagcgcggttacgatgtggtgtccggtggcactaaaaaccacctgttcctg
gtcagcctgatcaagcaggacattaccggtaaggacgcggacgctgccctggggcgtgct
cacatcaccgtcaacaagaatgcggttcccaacgatccgcgctctccgtttgtcacttcg
gggctgcgtatcggtaccccggcggtgaccacccgtggattcggtgagaccgagtgtcgc
gacctggctggctggatgtgtgacatccttgacaacctggaggacgatgccgtcaataac
cgcgtgcgtgaacaggttgaagctgtgtgtgctcgcttcccggtgtacgcgggctaa
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