Marinobacter sp. NP-4(2019): EHN06_04675
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Entry
EHN06_04675 CDS
T09527
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
manp
Marinobacter sp. NP-4(2019)
Pathway
manp02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EHN06_04675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
manp02022
]
EHN06_04675
02035 Bacterial motility proteins [BR:
manp02035
]
EHN06_04675
Two-component system [BR:
manp02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
EHN06_04675
Bacterial motility proteins [BR:
manp02035
]
Pilus system
Twitching motility proteins
EHN06_04675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
VpsR
AAA_16
HTH_50
HTH_30
AAA_19
AAA_5
nSTAND3
HTH_28
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
AZT82893
LinkDB
All DBs
Position
complement(1036334..1037719)
Genome browser
AA seq
461 aa
AA seq
DB search
MTTHTALIVDDEPDIRDLLEITLTRMGINTLTAPDITSARKLLEEHHPHLCLTDMNLPDG
NGIDLVHWIQQHTPCTPVAVITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALK
LSEPKPELEIAPDEPGLLLGNSAEIKRLRNQVRKLARSQAPVFISGESGSGKELVARMIH
LQGPRREGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVDNKEGLFRTADGGTLFLDEVA
DLPIAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGTFRQDLFYRIN
VIELAVPPLRERPDDIALLANHILERIAREYECEPATLTPDAIERLKEYEFPGNVRELEN
ILERAFTLCDNDRIGASDLHLGNAPTPPGLGGAATREITRNAEQADVPDGEIDLEGYLET
IERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcacaccgcgctgattgtagacgatgaaccggacatccgggatcttctggaa
attaccctgacccgcatggggatcaacaccctgaccgcgccggacattaccagcgcccgc
aagctgctggaagaacaccaccctcatctctgcctgaccgacatgaacctgccggacggc
aacggtatcgatctggtgcactggattcagcaacatacgccgtgcacgccggttgccgtg
atcaccgcctacggcaatatggacaccgccattgaatccctgaaagccggcgccttcgac
tttgtctccaagccagtagagcttccacgcttgcgggaactggttaatagcgcactcaag
ctctccgaacccaaaccggagctggagatcgccccggacgagcccgggctgcttctggga
aactcggctgaaatcaaacggctgcgcaaccaggtccgcaagctcgccagaagccaggca
ccggtctttatcagcggcgagtccggcagcggtaaggaactggtggcgcggatgatccac
ttgcaggggccacgacgggagggccctttcattgcggttaactgtggtgccattccctcc
gagctaatggaaagtgagttcttcggtcacaagaaaggcagtttcaccggcgcggtggac
aacaaagagggcctcttccgcaccgctgacggcggcaccctgttccttgacgaagtcgcc
gacctgcccatcgccatgcaagtcaaactgctcagggcgatccaggaaaaagcggtgcgg
ccggtgggagataccaaagaagtgcccgtggacatccgggtgctcagtgctacccacaag
aacctgccagaactggtgcaggagggtacgttccgccaggatctgttctaccgtatcaac
gtcattgagctggccgtgccaccgctgcgggaacgccctgatgacatcgcgctgcttgcc
aaccatatcctcgagcgtattgcccgtgaatatgagtgcgagcccgccaccctgacgccc
gatgccatagagcgcctcaaggaatacgagtttcccggcaacgtccgtgaacttgaaaac
atactggaacgggcctttaccctgtgcgacaacgaccggatcggcgcctccgacctccac
ctgggcaacgcccccacgccgcccgggctgggcggtgcggcaacccgtgaaatcacccgc
aatgccgaacaggccgacgtccccgatggtgagattgacctcgaaggttacctggaaacc
atagagcgacaagccatcgagaaggccctggaggctacccgctggaacaagacagccgcg
gccaagcggctggggatcagtttccgggcgttgcggtatcggttgaagaagttggggatg
gagtag
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