Marinobacter sp. NP-4(2019): EHN06_05635
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Entry
EHN06_05635 CDS
T09527
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
manp
Marinobacter sp. NP-4(2019)
Pathway
manp03410
Base excision repair
manp03430
Mismatch repair
manp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EHN06_05635 (recJ)
03430 Mismatch repair
EHN06_05635 (recJ)
03440 Homologous recombination
EHN06_05635 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manp03400
]
EHN06_05635 (recJ)
DNA repair and recombination proteins [BR:
manp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EHN06_05635 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EHN06_05635 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EHN06_05635 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AZT83066
UniProt:
A0A3T0CRA3
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All DBs
Position
1233355..1235091
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AA seq
578 aa
AA seq
DB search
MTPKKILRRPRPETLSGWGQNLPPLLRRLYAARGVTSDEQLSYTLKHLASPMELRGIDRA
VELLSEAIAGQQRVMILGDFDADGATSTAVAMLGLSMLGLKSVDFRVPSRFADGYGLTPG
IIHRLKDEGELPDLIVTVDNGISAVEGVRAAKELGIRVVVTDHHLAGETLPNADAIVNPN
QPGCLFLSKNAAGVGVMFYVLTALRKHLREQGRLPEPQPNLGTLLDLVALGTVADVVPLD
HNNRIFVEQGLRRIRQGEARPGILALLEVAGRDHTAISSTDLGFVVGPRLNAAGRLDDMS
IGIACLLADSPDEARRLAKELDTFNRERRTIEKDMKAQAQDLLASMSLDLEGLPWGLALY
DPEWHQGVIGILAARIREQTNRPTVAFAADDNGEDIKGSARSIPGLHIRDALAVVDSRHP
GLMKKYGGHAMAAGMTLARGDLDTFCEAFDKAVRDTLKPEDLEAAIVTDGPLSNQELCLD
TASLLKRAGPWGQHFPEPLFDGEFRVVSQRIVGENHLKLVLQPADGSGIVDGIAFNTGPE
VPDYTKTGARVVYKPDANTFRGRTNLQLLVDYLEPLSS
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacacccaaaaagatcctgcgtcgcccccggccagaaactctttcgggctgggggcaa
aacctgccccctttgcttcgccgtctttatgccgcgcgcggcgttacctccgacgaacag
ctgagttataccctgaaacatctggcctcgccgatggagttgcgcggcatcgaccgggcg
gtggaactgctgtcggaagcgattgccggccagcagcgggtgatgatcctcggtgatttc
gacgctgacggcgcgaccagtactgccgtcgctatgctcggtctctcgatgctgggcctg
aaaagcgtcgacttccgggtgcccagccggtttgctgacggttatggcctgacccccggc
atcatccatcggctcaaagatgagggtgagctgcccgacctgatcgttacggtggacaat
ggcatttccgctgttgagggcgtccgggcggcgaaagagctgggtatccgggtggttgtc
accgaccaccacttggcgggcgaaaccctgccgaatgcggatgcgattgtgaaccccaat
cagccgggctgcctgtttctcagcaaaaacgccgccggtgtcggcgtgatgttctatgtg
ctcaccgcgctacgcaaacacctgcgggaacagggcaggctgccggagccgcagcccaac
ctgggcaccttgctggatctggtggcgctgggcactgtggccgatgtggtgccgctggat
cacaacaaccggatttttgtcgaacagggcctgcgccggattcgtcaaggtgaggcccgc
ccgggtattctggcgctgctggaagtggctggccgcgatcacaccgctatcagttccacc
gatcttggttttgttgtcggcccccgccttaacgctgccggccggctcgatgacatgagc
atcggcatcgcctgcctgctggccgacagtcccgacgaagcccgccggctggcgaaagag
ctggacaccttcaaccgcgaacgccgcaccattgaaaaagacatgaaagcccaggcccag
gacctgctggcgtccatgtccctggacctggaaggcttaccctgggggcttgcgctgtat
gacccggagtggcatcagggcgtcatcggcatcctcgctgcccggattcgcgaacaaacc
aaccgcccgacggtggcgtttgccgccgacgacaacggcgaagacatcaaaggctcggct
cgctccatccccggcctgcacatccgcgatgccctggcggtcgtggattcacgccatccc
ggtttgatgaaaaaatacggtggccacgccatggccgccggcatgaccctggccaggggc
gatctggataccttctgtgaagccttcgataaggcggtgcgagatacgctcaagccggag
gacctggaagctgccatcgtcaccgacggcccgctgagcaaccaggagttgtgcctggac
accgcctccctgctcaaacgtgccggtccctggggccagcacttccccgagccgttgttc
gacggagaattccgcgtggtcagccagcgtatcgtcggcgagaaccacctgaaactggtg
ttgcagcccgctgatggcagcggcattgttgacggtattgcgttcaacaccggcccggaa
gtgcccgactacaccaaaaccggggcgagggtagtctacaagccggatgccaataccttc
agggggcgtaccaaccttcagttgttggtggattacctggagccgctgagctcctga
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