Marinobacter sp. NP-4(2019): EHN06_08480
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Entry
EHN06_08480 CDS
T09527
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
manp
Marinobacter sp. NP-4(2019)
Pathway
manp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHN06_08480 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manp03400
]
EHN06_08480 (uvrB)
DNA repair and recombination proteins [BR:
manp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHN06_08480 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EHN06_08480 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_22
AAA_30
Viral_helicase1
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AZT83572
UniProt:
A0A3Q9NLZ6
LinkDB
All DBs
Position
1860190..1862250
Genome browser
AA seq
686 aa
AA seq
DB search
MATSETGALMKDGAFKVDSPFQPAGDQPKAIEGLVDGIQSGLAHQTLLGVTGSGKTFSIA
NVIQQVQRPTIIMAHNKTLAAQLYGEFREFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIE
KDASINEHIEQMRLSATKALLERPDAIIVATVSSIYGLGDPQSYLKMMLHLDRGDQIDQR
DILRRLAELQYTRNDVEFHRANYRVRGDVIDVFPAESEKEAIRIELFDDEVENLSYFDPL
TGEVLRRVPRVTIYPKSHYVTPRQTVLDAVERIKVELDERLQQLRDNNRLVEAQRLEERT
RYDIEMMMELGYCNGIENYSRYLSGRRPGEAPPTLFDYLPPNALLVVDESHVTIPQIGAM
YKGDRSRKETLVEYGFRLPSALDNRPMRFDEWERIAPQMIFVSATPGNYEAEHAGQVVEQ
VVRPTGLLDPEIEVRPASTQVDDLLSEIRARTAVNERVLVTTLTKRMAEDLTDFLMEHDI
RVRYLHSDIDTVERVEIIRDLRRGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRS
ERSLIQTIGRAARNVHGKAILYGDRITGSMQRAIDETERRRAKQEAHNLEQGITPQGLNK
KIADIMEGAGGGGRGRRRAERPGEKAAEEAEKYRARTGNKSPQEVLKEVARLEDEMYKAA
SELDFETAARLRDDITELKEAALRTG
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggccacttcagaaaccggcgccctcatgaaagacggggcgttcaaggtcgattcacca
ttccagcccgccggggaccagcccaaggctattgaagggctggtggatggtattcaatcg
ggtctggcgcaccagacgctgctgggggtgaccggctcgggcaagacgttcagcattgcc
aatgtgatccagcaggttcaacgaccgaccatcatcatggctcacaacaagactctggcg
gcgcagctgtatggggagttccgggagttctttccggacaatgccgttgagtacttcgtt
tcctattacgactactatcagccggaagcctatgtgccttcctcggacacctttatcgaa
aaggatgcgtccatcaacgagcacatcgagcagatgaggctgtcggcgaccaaggccttg
ctggagcggccggacgcgatcattgtggccacggtctcctcgatttacggcctgggcgat
ccgcagtcctacctgaaaatgatgttgcacctggaccgcggcgaccagatcgatcagcgc
gatattctacgccggctggccgagctgcagtacacccggaatgatgtcgagttccaccgg
gccaattaccgggtcaggggcgatgtcatcgatgtgttcccggcggaatcggagaaagag
gccattcggatcgagttgttcgatgacgaggtggaaaacctgagctatttcgatccgctc
accggtgaggtgctgcggcgggtgccccgggtcacgatctatcccaagtcccactatgtc
accccgaggcagactgtgctggatgcggtcgagcgtatcaaggtggagctggacgaacgg
ctgcagcagttgcgggacaataaccggttggtggaagcccaacgtctggaagagcgcacc
cgctacgacatcgagatgatgatggagctgggctactgcaacggcatcgagaactactcc
cgctatctctctggccgccgtcccggtgaggcgccgcccacgctgttcgattacctgccg
cccaacgccttgctggtggtggacgagtctcacgttaccattccccagatcggcgccatg
tacaagggcgaccggtcccgcaaggaaaccctggtggagtacggtttccgcttgccgtca
gccttggacaaccggcccatgcggttcgatgaatgggagcggattgcgccccagatgatc
ttcgtttccgctactccaggcaactatgaggccgaacacgcgggccaggtggttgagcag
gtggtgcggccgaccggactgttggacccggagattgaagttcgtcctgcgtccacccag
gtggacgatctgttgtcggaaatccgcgcccgtacagctgtgaatgagcgagtgctggtc
accaccctgaccaaacgcatggcggaggatctaacggacttcctgatggagcacgatatc
cgtgttcgttacctgcactcggacatcgatacggttgagcgggtggaaatcattcgcgac
ctgcgccggggtgagtttgacgtgctggtgggcatcaacctgctgagggaaggtctggac
atgccagaggtatccctggtggcgatcctggacgccgacaaggaaggtttcctgcggtcc
gaacgctcactgatccagaccattggccgtgctgcgcggaacgtgcatggcaaggcgatt
ctttacggcgaccgcattaccggttccatgcagcgggccattgacgagaccgagcgccgg
cgcgccaaacaggaagcccacaacctggaacagggcattacgccccagggtctgaacaag
aagattgccgatatcatggagggcgctggtggtggcggtcgcggtcgccgcagggccgaa
cggcccggtgagaaagcggcggaagaagccgagaagtaccgcgccaggaccggtaacaag
tcgcctcaggaagtgctcaaggaagtggcgcgtctggaggacgaaatgtacaaggcggct
tcggagctggatttcgagaccgccgcccgactgcgggacgatattaccgagctgaaagag
gccgcgctgcggaccgggtag
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