Marinobacter sp. NP-4(2019): EHN06_09355
Help
Entry
EHN06_09355 CDS
T09527
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
manp
Marinobacter sp. NP-4(2019)
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
manp03032
]
EHN06_09355 (topA)
03400 DNA repair and recombination proteins [BR:
manp03400
]
EHN06_09355 (topA)
Enzymes [BR:
manp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EHN06_09355 (topA)
DNA replication proteins [BR:
manp03032
]
Prokaryotic type
DNA Topoisomerases
EHN06_09355 (topA)
DNA repair and recombination proteins [BR:
manp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EHN06_09355 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AZT83730
LinkDB
All DBs
Position
2032436..2035075
Genome browser
AA seq
879 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGPDFIVKSSVGHIRDLPVSGSGSQSDPKERAKQAAATRK
MSPEEKAAHKKRKAREQLVARMGVDPDQDWSARYEILPGKEKVVSELKRLAKSADHIYLA
TDLDREGEAIAWHLQQTIGGDSDKYRRVVFNEITKRAIQAAFEDPGALDNNRVNAQQARR
FLDRVVGYMVSPLLWAKIARGLSAGRVQSVAVRLIVEREREIRKFIPEEFWQLHADLGAR
QAKEPVRFEVTRYQDKPYRPVNEQQSNEHVDRLKGGSFHVAKREDKPTKSRPSAPFITST
LQQAASNRMGFSVKKTMMLAQRLYEAGYITYMRTDSTNLSQDAVGSCRDFIKKQFGDRYL
PEKPRVYGSKEGAQEAHEAIRPTEVSRRPADISGLEKDAEKLYDLIWRQFIACQMADAEF
LSTSIVVANGDYELRTRGRIIKFDGFLKAAPQSSKKDEDVALPDIKVDETLDLAKLEPSQ
HFTKPAPRYTEASLVKELEKQGIGRPSTYASIISTIQDRGYVRLQNRRFYAEKMGEIVTE
RLSESFPNLMDFDFTAKMEDELDDIAEGEVDWKKVLNDFYGRFRKQLETAEGSDEGGMRA
NTPTETDIPCPSCSRPMQIRVASTGVFLGCSGYSLPPKERCKTTINLVSGDEVVSADDDV
EGEGETLLLRKKRRCPKCGTAMDSYLVDESRKLHVCGNNPDCSGFEVEKGTFRIKGYEGP
TLECDKCGSEMQLKTGRFGKYFGCTNTECKNTRKLLKSGEPAPPKMDPVPMPELQCQKVD
DTYVLRDGASGLFLAASKFPKNRETRPPLVMEIKPHRKEIDPKYDYLMDAPERDPEGNPT
VIRYSRKSKEQYVMSEKEGKATGWSAWYVNGKWQPKEKK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagtctcgttattgtcgagtcgccagcgaaagcgaagaccatcaacaaatat
ctgggccccgactttattgtaaagtcgagcgtcgggcatattcgtgaccttccggtcagc
ggcagtggctctcagtcagatcccaaagaacgtgcgaaacaggcggcggcaacgcgcaag
atgagcccggaagaaaaagccgcgcacaaaaagcgcaaggcccgggaacagctggtggcc
cgcatgggtgtggacccggaccaggactggagcgcccgctacgagattctgccgggcaag
gaaaaggtcgtcagtgaactcaagcgcctggcgaaatccgcggaccatatctatctggca
acggatttggaccgcgaaggggaggcgattgcctggcaccttcagcaaaccattggcggt
gattctgacaagtaccgccgcgttgtcttcaacgaaatcaccaagcgcgcgattcaggcg
gcgtttgaagatccaggcgccctggacaataaccgcgtcaatgcccagcaggcccggcgt
ttcctcgaccgggttgtgggctatatggtgtcgccgctgctatgggccaagattgcccgg
gggttgtcggccggtcgtgtccagtccgtggcggtgcgcctgatcgtcgagcgtgagcgc
gagatccgcaagttcattccggaagaattctggcaattgcacgcggatcttggtgccagg
caggccaaagagccagtacgctttgaggtcacccgttatcaggacaaaccctaccgccct
gttaacgagcagcaaagcaacgagcatgttgatcgcctgaaaggcggctcgttccacgtt
gccaagcgcgaagacaagccgacaaagtcccgaccgtcagcgccttttattacctccacg
ctgcagcaggcggccagtaaccgcatgggcttcagcgtcaaaaaaaccatgatgctggcc
cagcggctctatgaggctggctatatcacctacatgcggacggattcgaccaacctgagt
caggatgcggttggcagttgccgggattttatcaagaagcagttcggcgaccgctacctg
ccggagaagcccagggtctatggcagcaaggaaggcgctcaggaggcccacgaggccatt
cgcccgacagaggtgagccgcaggcccgccgatatcagtggcctggagaaggatgctgag
aagctctacgatctgatctggcgacagtttatcgcgtgccagatggctgacgccgagttc
ctgagcacttcaatcgtagtggccaacggcgactatgagctgcgtacccgtggccgcatt
atcaagtttgacggtttcctcaaggcggcgccccagtcatcgaagaaagacgaagatgtg
gcattgccggatatcaaggttgatgagacgttggatctggccaaactggagccgagccag
cactttaccaagccggccccgcgatacacggaagcgagtctggtcaaggaactggaaaag
caggggattggtcgcccatccacctacgcctccatcatttccaccattcaggaccgcggt
tacgtcaggctgcagaaccgtcgtttctacgccgagaaaatgggggaaatcgtcaccgaa
cgcctgtccgagtccttcccgaacctgatggacttcgacttcaccgcgaagatggaagat
gagctggatgacatcgccgaaggtgaagtggactggaagaaagtactgaatgacttctat
ggccgtttccgcaaacaactggagaccgccgaaggcagtgacgaaggcggcatgcgcgcc
aacacgcccacggagacggacattccgtgcccgagttgcagtcgcccgatgcagattcgt
gtcgccagcaccggcgtattcctggggtgctccggttattccctgccgccgaaagagcgc
tgcaaaaccaccatcaacctcgtgtcaggggatgaggtggtcagtgccgacgatgacgtg
gaaggtgagggcgaaaccctcctgttgcgcaagaaacgccgttgcccgaaatgcggaacg
gccatggacagctatctggtggatgaaagccgcaaacttcatgtatgcggtaataacccc
gactgctccggcttcgaagtggagaagggcaccttccgcatcaaggggtatgaaggccca
acactggaatgtgacaagtgcggttccgagatgcagttgaaaaccggccgtttcggcaag
tatttcggctgtaccaacactgaatgcaagaatacccgtaagctactcaagagtggcgag
ccggcgccgcccaagatggatccggtgccgatgccggaacttcagtgccagaaggtggat
gatacttacgtgctgcgggacggtgcctccggtctgttccttgctgccagcaaattcccg
aagaaccgggaaacccggccgccgctggtgatggaaatcaagccgcatcgcaaggaaatc
gacccaaaatacgattacctgatggacgcgcccgagcgtgaccccgagggcaacccaacg
gtgattcgctacagccgcaagagcaaggagcagtacgtcatgtccgagaaagagggcaag
gcgacgggctggtcggcgtggtatgtgaacgggaagtggcagccgaaggagaagaagtag
DBGET
integrated database retrieval system
