KEGG   Marinobacter sp. NP-4(2019): EHN06_09400
Entry
EHN06_09400       CDS       T09527                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
manp  Marinobacter sp. NP-4(2019)
Pathway
manp00010  Glycolysis / Gluconeogenesis
manp00020  Citrate cycle (TCA cycle)
manp00260  Glycine, serine and threonine metabolism
manp00280  Valine, leucine and isoleucine degradation
manp00310  Lysine degradation
manp00380  Tryptophan metabolism
manp00620  Pyruvate metabolism
manp00630  Glyoxylate and dicarboxylate metabolism
manp00640  Propanoate metabolism
manp00670  One carbon pool by folate
manp00785  Lipoic acid metabolism
manp01100  Metabolic pathways
manp01110  Biosynthesis of secondary metabolites
manp01120  Microbial metabolism in diverse environments
manp01200  Carbon metabolism
manp01210  2-Oxocarboxylic acid metabolism
manp01240  Biosynthesis of cofactors
Module
manp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
manp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
manp_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:manp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    EHN06_09400 (lpdA)
   00020 Citrate cycle (TCA cycle)
    EHN06_09400 (lpdA)
   00620 Pyruvate metabolism
    EHN06_09400 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    EHN06_09400 (lpdA)
   00640 Propanoate metabolism
    EHN06_09400 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EHN06_09400 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    EHN06_09400 (lpdA)
   00310 Lysine degradation
    EHN06_09400 (lpdA)
   00380 Tryptophan metabolism
    EHN06_09400 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    EHN06_09400 (lpdA)
   00670 One carbon pool by folate
    EHN06_09400 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:manp04147]
    EHN06_09400 (lpdA)
Enzymes [BR:manp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     EHN06_09400 (lpdA)
Exosome [BR:manp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   EHN06_09400 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA HI0933_like FAD_oxidored DAO FAD_binding_3 AlaDh_PNT_C Lys_Orn_oxgnase NAD_binding_8 Thi4 3HCDH_N Lycopene_cycl Agglutinin_C UDPG_MGDP_dh_N 2-Hacid_dh_C GP40
Other DBs
NCBI-ProteinID: AZT83739
UniProt: A0A3Q9NHQ6
LinkDB
Position
2045587..2047029
AA seq 480 aa
MSDKYDVIVIGAGPGGYVAAIKAAQLGLKTACVESWTSEDGKAQVLGGTCLNVGCIPSKA
LLEISHKFEEASHDYETQGIIAKDVKIDIAKMMERKSGIVKQLTGGIAGLFKANGVTSIH
GHGKLLANRQVEVTDKDGKTTTYEADNVILATGSKPIEIPPAPFDGNYIVDSEGALEFTE
VPKRLGVIGAGVIGLELGSVWSRLGSEVTVIEAQDTFLPVVDQQVAKDAQKQFKKQGLDI
VMGARMTGAEVKRKLVNVTYEDSNGKQEKKFDKLIVAVGRRPYTDNLLSEDSGVKMDERG
FIFVDDNCKTEAPGVWAIGDVVRGPMLAHKASEEGVMVAERIAGHKPQVNYDCIPNVIYT
APEVAWVGKSEEDLKAEGEAYKVGTFPFAANGRAMAANAASGLVKIIADEKTDRILGFHV
VGPQASEIVAQGVIAMEFGSSAEDLALTCFAHPTLSESVHEAALAVDGGAIHIANRRKKK
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgtctgataagtacgacgtcattgtgattggtgcgggccctggtggttacgtagccgct
atcaaagccgcccagctcggcctgaagactgcgtgtgtggagtcctggacctctgaggac
ggcaaagcccaggtgcttggtggaacctgtctgaatgtgggctgtattccttccaaggcg
ctgctggagatttcccacaaatttgaggaagccagccacgattacgagacgcagggcatc
atcgccaaagatgtcaaaatcgacatcgcgaagatgatggagcgtaagagcggtattgtg
aagcagttaaccggcggtatcgccggtctgttcaaggccaacggtgtaacttccattcat
ggccacggtaagttgctggccaatcggcaggttgaagtcactgacaaggatggcaagacc
accacttacgaggcggacaacgtcatcctggcgaccggctccaagccgatcgagattccg
cctgcaccgtttgacggtaattacattgtggattccgagggtgcactggagttcaccgaa
gtacccaagcgtcttggcgtcattggtgccggcgttattggccttgagttgggcagtgta
tggtcccgtctgggatcggaagtgactgtgatcgaagcccaggatacattcctgccggta
gttgatcagcaggttgccaaggacgcgcagaagcagttcaagaagcagggactggatatt
gtcatgggtgcacgcatgaccggtgctgaagtcaagcgcaagctggtgaacgtgacctat
gaagactcgaacggcaagcaagagaagaaattcgacaagctgatcgtggctgttggtcgt
cgcccttacaccgataatctgttgtcagaggactctggtgtaaagatggatgagcgtggc
ttcattttcgtggacgataactgcaagactgaagctccgggtgtctgggcgattggtgac
gtggttcgtggtccgatgctggcacacaaggcatccgaagagggggtcatggtcgctgaa
cggatcgctggccataagccgcaggtcaactacgactgcattcctaacgtcatctatacg
gcaccggaagtggcctgggttggtaagtccgaagaagacctgaaggccgaaggcgaggct
tacaaggtggggactttcccatttgccgccaatggccgtgccatggccgccaatgcggcg
tccggcctggtcaagattatcgctgacgaaaagaccgatcgcatccttggcttccacgtt
gtgggaccccaggcatccgagattgtcgcgcagggcgtgattgcgatggagtttggctcc
agtgcagaagacctggctctgacctgttttgcgcacccgactctgtccgagtctgtgcat
gaagcagccctggctgtcgatggcggcgcgattcacatcgccaaccgtcgcaaaaagaag
taa

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