Marinobacter sp. NP-4(2019): EHN06_10385
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Entry
EHN06_10385 CDS
T09527
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
manp
Marinobacter sp. NP-4(2019)
Pathway
manp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHN06_10385 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
manp03019
]
EHN06_10385 (recQ)
03400 DNA repair and recombination proteins [BR:
manp03400
]
EHN06_10385 (recQ)
Enzymes [BR:
manp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHN06_10385 (recQ)
Messenger RNA biogenesis [BR:
manp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EHN06_10385 (recQ)
DNA repair and recombination proteins [BR:
manp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EHN06_10385 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AZT85838
UniProt:
A0A3Q9NLU3
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All DBs
Position
2275593..2277449
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AA seq
618 aa
AA seq
DB search
MDFDQLSTERPTLSRKDPEQVLHEVFGYETFRPLQGEIIHEVVNGGDALVLMPTGGGKSL
CYQVPALVRPGTAVVISPLIALMQDQVAALNELGVRAAFLNSTMDFSQARDTENALMTGE
LDLLYCAPERLIQPRTIDLLHNASISLFAIDEAHCVSQWGHDFRSDYLELSLLAEQFPGV
PRIALTATADERTRKEIAERLSLTSARHFVSGFDRPNIQYRISPKTNANKQLLDFIKAEH
DGDCGIVYCLSRNKVDATARMLADKGYTALPYHAGLNATERARNQERFLREDGVIVVATI
AFGMGIDKPDVRFVAHLDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQMLEA
SMGNDQFKRVERQKLDAMLGLCEVTSCRRQVLLRYFGDVLEEACGNCDTCLNPPDTWDGT
VAVQKALSCVFRTGQRYGVTYLIDVLRGSENERIRQFGHDKVSTYGIGTELSANEWKSVF
RQLVANGYLRADPEGYGSLQLTEQCRPLLKGNQPIQLRKDPAPVKSSGRTKSGSTRAKIS
DQITDQAGWDALRACRKSLAEQQGVPPYVIFHDTTLFDMLERRPKTLSELAAVNGVGAAK
LEKYGEIFLQTLRDLAQG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatcaactaagcacagagcgcccaaccctctcccggaaagaccctgaacag
gttctgcatgaggtctttggttatgaaaccttccgaccactgcaaggagagatcatccac
gaggtggtcaatggcggtgatgccctggtattgatgcctaccgggggcggtaaatccctg
tgctaccaggttccggcgctggtgcgcccgggtacggcagtggtgatttccccgttgatc
gccttgatgcaggatcaggtggcggcactgaatgaactgggcgtccgggcggccttcctg
aattccaccatggatttttcccaggccagggataccgaaaacgcgttgatgaccggcgag
ctggacctgctctattgtgccccggaacgactgatacagccgcgaacgatcgacctgctg
cacaacgcgtcgatatcgctgtttgccatcgatgaagcccactgcgtatcccagtggggg
catgacttccgttcagattatctggaactgagtctgctggccgagcaattccccggcgtt
cctcgcatcgcgctgactgcgactgcggacgaacgaacccgcaaggagatcgccgagcga
ttatctctgaccagtgcacgtcatttcgttagtggctttgatcgtccgaacatccagtat
agaatttcgccaaaaacaaatgccaacaaacagttactggattttattaaagcagaacat
gatggcgattgcggcattgtctattgcctgtcccgcaacaaggtggacgccaccgcacgt
atgctggcggacaaaggctataccgctctgccctaccatgccggcttgaacgcaacggaa
cgggcccggaatcaagagcggtttttacgggaagacggcgtcatcgtggtggctaccatc
gcgtttggtatgggcatcgacaaaccggacgttcggttcgtcgcccatctggatctcccc
aagagcctggaagcctactatcaggaaaccggtcgtgccggacgtgatggcaagccctca
accgcctggatggtctacggcctgcaggacgtcatcaagctccggcagatgctggaagcc
tccatggggaacgaccagtttaagcgggtcgagcgacaaaagctggacgccatgctgggg
ctttgcgaagtcaccagttgtcgtcgacaggttctgctgcggtattttggagatgtcctc
gaagaggcttgcggaaactgcgatacttgcctgaatccgccggatacctgggatggtacc
gtcgctgtgcagaaagcgttgtcctgcgtgttcagaaccggccagcgctacggcgttacc
tacctgatcgatgtactcagaggctctgaaaacgagcgtatccgccagtttggccatgac
aaggtctccacctacggcattggtacggaactctcggccaacgaatggaaatcggtgttt
cggcaactggtcgccaacggctatctcagggcggaccccgaaggctatggatcgcttcag
cttacggaacagtgccgcccgctgctgaagggtaaccagccaatccagctacgcaaggat
ccggcgccggtcaaatcctccgggcgaaccaagtctggcagcactcgcgcgaaaatcagc
gatcagattaccgaccaggctggatgggacgcgttaagggcctgccgcaagtcgctggcg
gaacagcagggtgttccgccctatgtgatattccacgacacgactctgttcgatatgctg
gaacgtcgccccaagacgctttcagaactggcggcagtaaatggcgtgggtgctgcaaag
ctggaaaaatacggtgagattttcctgcaaacccttcgggacctggcgcagggttaa
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