Marinobacter sp. NP-4(2019): EHN06_11340
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Entry
EHN06_11340 CDS
T09527
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
manp
Marinobacter sp. NP-4(2019)
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
manp03016
]
EHN06_11340
Enzymes [BR:
manp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EHN06_11340
Transfer RNA biogenesis [BR:
manp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EHN06_11340
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AZT84081
UniProt:
A0A3Q9NMN2
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All DBs
Position
complement(2494909..2496054)
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AA seq
381 aa
AA seq
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MASTLPAAAPAAPATVLWIREPADLDQWLANRDGLPLALDTEFERVNTFFPIPGLVQLGL
GSDYRLVDPGVAEQSDEFRRILADAEAPKLLYAMSEDLELFRHWLQLTPAGVVDLQIGAA
LAGAGFSVGYARLVETLFGETLDKSATRSDWVSRPLSEAQERYALDDIRFLAPMYQWVMD
NLRDRKLEQALFEESERFAAELSGQDDPEHHYLKLRGGWTLTPQQQAVLQKLVCWREEES
RRRDRPRGRVVADALLIAIADRLPDSVRELSNIQGLPQPVIRRYGDKILQLVGEGCESDV
SGMPLIAAPLTRQDQAFYKQIKRVIVTAAEKADVPVELLAPRKRLEAVVHQRDLSAGLFT
SGWRSQIIAPVREQLEELLTS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacccttcctgctgcggccccggcggcccccgccacggttctctggatacgt
gagcccgcggaccttgaccaatggctggcaaatcgcgacggcctgccgttggccctggat
accgagtttgagcgagtcaatacctttttcccgattcccgggctggtacagcttggactc
ggtagcgactaccgtctcgttgatccgggggtggctgagcagtccgacgagttccggcgg
attctggcggatgcggaggcaccgaagctgctgtatgccatgagtgaagatctcgaactg
ttccggcattggctgcaactgacgccagcgggtgttgtggacctgcagattggcgccgcg
ctggccggtgccggcttctccgttggttatgctcgtctggtggaaaccctgtttggggaa
accctggataaatccgcgacgcgctcggattgggtttcacgccccctgagcgaagcgcag
gaacggtatgcactggacgatatccgcttccttgcaccgatgtatcagtgggtgatggac
aacctccgggatcggaaactggaacaggctttatttgaagagtctgaacgctttgctgca
gaactctccgggcaggatgatcctgagcaccattacctgaaactgcgcggtggctggacg
ttaaccccccagcagcaggcggtcctgcagaaactggtctgctggcgtgaggaagagtcc
cgtcgccgtgatcgcccccgcggccgcgtggtcgcagatgcgctgctgattgccatcgcg
gaccggctgccggactccgtcagggaattatcgaacattcaggggctgcctcaaccagtg
atccggcggtatggtgataaaatattgcaactggtgggcgaaggctgtgagtccgatgtt
tcgggcatgccgctcattgcagcgccgttgacccggcaggaccaggctttttataagcag
ataaagcgcgtcattgtgacggcagcggaaaaagcggatgtacccgtggagctactggct
ccccggaaaagactggaagcggtggttcatcagcgcgacctgtcggctggtctttttacc
agcggctggcgcagccagatcattgcaccggttcgtgaacagcttgaggaattattgacg
tcatga
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