Marinobacter sp. NP-4(2019): EHN06_13620
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Entry
EHN06_13620 CDS
T09527
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
manp
Marinobacter sp. NP-4(2019)
Pathway
manp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EHN06_13620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
manp03400
]
EHN06_13620
Enzymes [BR:
manp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
EHN06_13620
DNA repair and recombination proteins [BR:
manp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EHN06_13620
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EHN06_13620
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EHN06_13620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
DUF4685
Motif
Other DBs
NCBI-ProteinID:
AZT84493
UniProt:
A0A3T0CVD1
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All DBs
Position
complement(2987044..2988492)
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AA seq
482 aa
AA seq
DB search
MIRSFYWHDYETFGVDPVHDRPSQFAGVRTDTDLNIIEDPLVIYCKPTDDYLPSPEACLI
TGITPQKAMEEGYPEAEFIAQINEAFSQPGTCVVGYNSLRFDDEVTRNTLYRNLRDPYAR
EWQNGNSRWDIIDMVRLTYALRPEGINWPRKEDGSPSFRLEELTVANGISHEAAHDAMSD
VEATIAVAKLIKEKQPKLFDFVLNNKDKHSARAMLDTASMKPVFHISAKYPASRGCCAMV
APVAEHPTNKNLVIVYDLREDPSELINATADQIRERVFTSQAELGEGKSRFALKGVQLNK
CPVLAPANMLSTLSPERLEELALDGEQLRANLALLRQAPDLPARIADAFNQDFNGSDLTD
PDEQLYAGGFISKTDREKLNWVLEQPVENLGELDVRFEDERLQEMLFRYRARNYPSTLIG
EEMERWEMFRSQRLMQPKKGWRSLEAYGQELQRLAADPDLTPKKQQILEDLHLYGESLIP
YV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgttctttctactggcatgactatgaaacctttggcgtggacccagtccatgac
cgaccctcgcagtttgccggtgtgcgtacggacaccgatttgaacattatcgaagacccg
ctggtgatctactgcaagccgacggacgattacctgccttcacccgaggcctgcctgatt
accggcatcacgccccagaaggcgatggaggaggggtacccggaagcggaattcatcgcg
cagatcaacgaggccttcagccagccgggcacctgcgtggtgggctataacagcctgcgt
tttgacgatgaggtgacccgaaacaccctgtaccgcaacctgcgcgacccctatgcccgg
gagtggcagaacggcaattcccgctgggacatcatcgacatggtgcggctgacctatgcc
ttgcgcccggagggcatcaactggccccgcaaggaagacggcagtccgagtttccgcctg
gaagagttgacagtcgccaacggcattagccacgaagcagctcatgatgccatgtcggat
gtggaagcgaccattgcggtggcgaagctgatcaaggaaaaacagcccaaattgttcgat
ttcgtgttgaacaacaaggacaagcactccgcccgggcaatgctggatactgcgtccatg
aagccggtgttccacatctccgccaagtatcccgcctcacgaggctgctgcgccatggtg
gccccggtggcggaacaccccaccaacaagaatctggtgattgtttatgacctgcgggaa
gatcccagcgagctgatcaacgccaccgctgatcagattcgtgagcgggtgtttacctcc
caggcggaattgggggagggcaaaagtcggtttgcgctgaagggtgttcaactgaacaaa
tgcccggtgctggcgcccgccaatatgctctccacgctctcgccggaacgcctggaagag
ctggcgctggatggtgagcagctaagggccaacctggctctgctgcgccaggcaccggat
cttcctgcccgcattgccgacgccttcaaccaggatttcaacggcagtgacctgaccgac
ccggatgaacagctttatgccggtggttttatcagcaaaaccgaccgcgagaaactgaac
tgggtgctggagcagccggtggagaatctgggtgaactggatgttcgctttgaagacgag
cggcttcaggaaatgctgttccgctaccgtgcgaggaactaccccagcactctgatcggc
gaggaaatggagcgttgggagatgtttcgcagccagaggttgatgcagcccaagaagggc
tggcggtcgctggaggcttatgggcaggaattgcagcgcttggcggcagatccggatttg
acgccgaagaagcagcagattctggaggatttgcatttgtatggggagtcgttgattcct
tatgtttga
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