KEGG   Marinobacter sp. NP-4(2019): EHN06_14115
Entry
EHN06_14115       CDS       T09527                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
manp  Marinobacter sp. NP-4(2019)
Pathway
manp02020  Two-component system
manp02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:manp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EHN06_14115
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    EHN06_14115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:manp03021]
    EHN06_14115
Transcription machinery [BR:manp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EHN06_14115
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AZT84587
LinkDB
Position
3105694..3107214
AA seq 506 aa
MKASLQLKLGQSLTMTPQLQQAIRLLQLSTLDLQQEIQQALDSNPMLETSEDDDTPDANT
SEQDHEESPKSEETASATESTSDWDESENGPDWASENDIPDNIPDDLPVDTAWDDIYQSA
PAPAARNEDENDSDFETRNSPTETLQDHLEWQLNLTPLSERDQAIAHALMDAVDERGYLA
SSIEEIHSGLVDDTEDDPLELDEVEAVLHRLQHFDPPGVFACNLQECLLIQLNQLPPDTP
WLAQARLVITHYINLLGNRDYAQLLRRSRLKEDQLREVLALITSLNPRPGDSVDRAEPDY
VIPDVMVRKHNGRWRVELNPDIAPRIRVNASYASLIKRADSSADNTYLRDQLQEAKWFIK
SLQSRNETLLKVATRIVEHQQGFLDHGEEAMKPLILSDIAQAVEMHESTISRVTTQKYMH
TPRGIFELKYFFSSHVSTDEGGECSSTAIRAMIKKLIAAETPKKPLSDSKIAAMLGEQGI
KVARRTVAKYREAMHIPPSNERKRLV
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgaaagcgtcattacagttaaaactgggtcagagcctgaccatgacgccccagttgcag
caggcgatcaggcttctgcaactctctactctcgaccttcagcaggaaatccagcaggct
ctggactccaaccccatgctggaaacctcggaagacgacgataccccggatgccaatacc
tccgagcaggaccacgaagagtccccgaagtccgaggaaaccgcttcggcgacggagtcc
acctccgactgggatgaatccgagaacggtcccgactgggcatcggagaatgacattccc
gataacattccggacgatttgccagtagataccgcctgggatgacatctaccagtcagca
ccggcaccggcggcccgcaatgaagacgagaacgacagcgacttcgaaacccgcaattcc
ccgaccgagacccttcaggaccatctcgaatggcagttgaacctgacccccctgagcgaa
cgggaccaggccatcgcccatgccctgatggacgcagtggatgagcgtggctacctggcc
tcatccatagaggaaatccattccggactggtggacgacaccgaggacgacccgctggaa
ctggacgaagtggaagcagtgctgcaccgactgcagcactttgatccacccggcgtcttt
gcctgcaatctgcaggagtgtctgctgatccagctcaaccagttgccgccggacaccccc
tggctggcccaggcgcgactggtcattacccattacatcaacctgctgggcaaccgggat
tacgcacaactgctgcgccgtagccgcctgaaggaagatcagttgcgggaagtgctggcg
ctgatcaccagtctcaacccacggccgggcgattcggtagaccgggccgaaccggattac
gtcattcccgatgttatggttcgcaagcacaacggccgctggcgagtcgaactcaatccc
gacattgctccccggatccgggtcaatgccagttacgcttccctgatcaagcgcgcggac
agcagcgccgacaacacctacctgagggatcagcttcaggaggcgaaatggttcatcaag
agcctgcaaagccgaaacgaaaccctgctcaaggtggccacacggattgtcgagcatcag
cagggctttctggatcacggcgaagaagcgatgaagccgttgattctgtcggacattgcc
caggccgtggaaatgcacgagtccaccatttcccgggtgaccacccagaaatacatgcat
acaccccgtggcatctttgaattaaagtactttttctcgagccacgtcagtactgatgag
ggtggagagtgttcctccaccgcgatccgtgccatgatcaagaaactgattgcggcagaa
actccgaaaaagccattgagcgatagcaaaattgcagccatgctaggagaacagggtatc
aaggtagccaggcggaccgtagccaaatatcgtgaggctatgcacattccgccttccaat
gaacggaaacggctggtttga

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