Marinobacter sp. NP-4(2019): EHN06_14200
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Entry
EHN06_14200 CDS
T09527
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
manp
Marinobacter sp. NP-4(2019)
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
manp03009
]
EHN06_14200 (rimO)
Enzymes [BR:
manp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EHN06_14200 (rimO)
Ribosome biogenesis [BR:
manp03009
]
Prokaryotic type
ribosomal protein modification factors
EHN06_14200 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AZT84602
UniProt:
A0A3T0CVB1
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All DBs
Position
complement(3124840..3126183)
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AA seq
447 aa
AA seq
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MTDKLQTSVTGSGKVGFISLGCPKALVDSERILTQLRLDGYDVVPTYDDADIVVVNTCGF
IDAAKQESLDAIGEAINENGKVIVTGCMGVEADKIRETHPGVLAVSGPHAYEEVVGAVHQ
FVPPKKEHDPFTDLVPPQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDV
MDEAKRLVDAGVKELLVISQDTSAYGVDTKYRTGFWQGRPLKTRMQSLCEALGEMGVWVR
LHYVYPYPHVDDVIPLMAEGKILPYLDIPFQHASLRVLKAMKRPAHDSKTLERIRKWREI
CPELTIRSTFIVGFPGETEEDFQYLLDWLDEAQLDRVGAFKYSPVEGARANEIEGAVPEE
VKEERLARFMEKQARISAARLQAKIGQTIDVLIDEVDEEGAIGRSKADAPEIDGMVYLND
ETDLVPGQIVQAVVEHADEHDLWGRLL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaaactccaaacctccgtaaccggcagcggcaaagttggcttcatcagcctt
gggtgcccgaaagcactggtcgattccgaacgcatcctcacccagctgcggctggatggc
tatgacgtagtgccaacctatgacgatgccgacatagtggtggtgaacacctgcgggttt
atcgacgcggccaagcaggaatccctggacgccattggcgaggcgatcaacgaaaatggc
aaggtgattgttacaggctgcatgggtgtggaggcagacaaaatccgcgagacccatccg
ggcgttctggcggtatccggcccccacgcttacgaagaggttgtgggggcggtgcatcag
ttcgtgccaccgaaaaaagagcacgacccgttcaccgatctggttccaccccagggcgtg
aaactgacccccaggcactacgcctacctgaaaatctccgaaggctgtaaccatcgctgc
accttctgcatcatcccgtccatgcggggtgatctggtcagccgccccatcggtgatgtg
atggacgaggccaaacgcctggtggatgcgggggtcaaagaactgctggtgatctcccag
gacacctcggcctacggtgttgataccaagtaccgcaccggtttctggcagggccggccg
ttgaagaccaggatgcagtcactctgtgaggcgctgggcgaaatgggcgtgtgggtgcgt
ttgcactatgtttacccctatccccacgtggacgacgtgattccgctgatggccgaaggc
aagatcctgccgtacctggacatcccattccagcacgccagtctgcgggttctcaaggcg
atgaaacgcccggcccacgacagcaagactctggagcgcatccgcaagtggcgggaaatc
tgccccgagctgaccatccgctccaccttcatcgttggtttccccggtgaaaccgaagag
gattttcagtacctgctggactggctcgacgaagcccaactggatcgcgtcggcgcgttc
aaatacagcccggtggaaggtgccagggccaacgaaatcgaaggtgcggtgcccgaggaa
gtgaaagaagagcgcctggcccgctttatggaaaaacaggcccggatctccgctgcccgc
ctgcaggccaagatcggtcaaaccatcgatgtgctgatcgacgaagtcgacgaagaaggt
gccattggccgctccaaggctgacgcaccggagatcgacggcatggtttatctcaacgac
gaaaccgacttggtgccggggcagatcgttcaggctgtcgtcgagcatgcggatgagcat
gatctatggggtcggcttttgtag
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