Marinobacter sp. NP-4(2019): EHN06_17140
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Entry
EHN06_17140 CDS
T09527
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
manp
Marinobacter sp. NP-4(2019)
Brite
KEGG Orthology (KO) [BR:
manp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
manp03016
]
EHN06_17140 (truB)
Enzymes [BR:
manp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EHN06_17140 (truB)
Transfer RNA biogenesis [BR:
manp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EHN06_17140 (truB)
Prokaryotic type
EHN06_17140 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AZT85141
UniProt:
A0A3Q9NNU2
LinkDB
All DBs
Position
complement(3757786..3758706)
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AA seq
306 aa
AA seq
DB search
MSRRRKGRDVNGILVIDKPLDVTSNGILQQVKRLFGAAKAGHTGALDPLATGVLPLCFGE
ATKFSQMMLDSDKAYIATAKLGVRTETGDSEGAVVEEKPVPASLDSAALEPILERFRGDI
QQVPSMYSALKHKGRPLYEYAREGIEVERPARPVTIYELTLLDVRDDELDIAVSCTKGTY
IRSLVEDIGEALGCGAHVTALRRTMASGFTLADAYPVDKLEAMRERGESLDGLLVAPDAA
LSMFPERELSGQSLVSIINGQPVRISGQPVDGFVRLYGNERFIGLAEAFPEGEATRLVPR
RLVKSS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcgcagacgcaaaggccgtgacgttaacggtatcctggtgatcgacaagcctctg
gatgtaacctccaatggcatcctgcagcaggtcaagcgcctgtttggtgcggccaaggcc
ggccataccggcgcgctggatccgctggcaacgggtgtccttcccctctgctttggtgag
gctacgaagttctcccagatgatgctggacagtgacaaggcctacatcgccacggcgaag
ctgggcgtgcgcaccgaaaccggtgacagcgaaggtgctgtggttgaggagaaacccgtg
cccgcgagcctggattccgccgccctggagccgatactggaacggtttcgtggtgatatc
caacaggtgccgtccatgtactcggcgctcaagcacaaggggcgtccgctctacgaatac
gcccgtgaaggcatcgaggtcgagcggcctgcccgccccgtcaccatctacgaactgaca
ctgcttgatgtgcgtgatgatgagctggatatcgctgtcagttgtaccaagggtacgtat
atccgctcactggttgaggatatcggtgaggcacttggatgcggggcccatgtcactgcg
ttgcgccgtaccatggcttcgggttttacactggcagatgcttatcctgttgataagctt
gaggccatgcgcgaacggggcgagagtctggatggcttgttagtggctccggatgcggcc
ctgtcgatgttcccggagcgggagctgagcggtcagtcgctggtatcgataattaacgga
caaccagttagaatatcgggtcagcccgttgatgggttcgttcgcctgtatggcaatgaa
cggttcatcgggttggcagaagcattcccggaaggggaggccaccagactggtgcctcgc
cgactggtgaagagcagctga
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